Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add missing definitions to dorsal and ventral pancreas #1135

Closed
cindyJax opened this issue Jul 19, 2015 · 3 comments
Closed

Add missing definitions to dorsal and ventral pancreas #1135

cindyJax opened this issue Jul 19, 2015 · 3 comments
Labels
autoclosed-unfixed This issue has been closed automatically.

Comments

@cindyJax
Copy link

Suggested definitions and synonyms for:

UBERON:0009708 dorsal pancreas
Def: The transient embryonic structure that fuses with the ventral pancreas during development to form a single organ; the dorsal pancreatic bud gives rise to the body, tail, and isthmus of the pancreas. [PMID:23909279]
Synonym: dorsal pancreatic bud

UBERON:0009709 ventral pancreas
Def: The transient embryonic structure that fuses with the dorsal pancreas during development to form a single organ; the ventral pancreatic bud gives rise to the pancreatic head and uncinate process. [PMID:23909279]
Synonym: ventral pancreatic bud

@cindyJax
Copy link
Author

see also Mammalian Phenotype Ontology tracker requests #2075 and #2076 for more extensive definitions.
I recommend making 'dorsal pancreatic bud' and 'ventral pancreatic bud' the preferred label.

@cmungall
Copy link
Member

note we have bud terms already

I think the two classes you mention should be merged into these. It looks like they were put in as an attempt to be consistent with EHDAA2:

[Term]
id: EHDAA2:0001389
name: pancreas ventral primordium duct bud
namespace: human_developmental_anatomy
is_a: AEO:0000115  ! epithelial sac
relationship: develops_from EHDAA2:0000573 ! foregut-midgut junction epithelium
relationship: ends_at CS16 ! CS16
relationship: part_of EHDAA2:0001387 ! pancreas ventral primordium
relationship: starts_at CS15 ! CS15

[Term]
id: EHDAA2:0001393
name: ventral pancreas
namespace: human_developmental_anatomy
is_a: AEO:0000097  ! ducted gland
relationship: develops_from EHDAA2:0001387 ! pancreas ventral primordium
relationship: ends_at CS18 ! CS18
relationship: part_of EHDAA2:0001367 ! pancreas
relationship: starts_at CS17 ! CS17

[Term]
id: EHDAA2:0001371
name: dorsal pancreas
namespace: human_developmental_anatomy
is_a: AEO:0000097  ! ducted gland
relationship: develops_from EHDAA2:0001384 ! pancreas dorsal primordium
relationship: ends_at CS18 ! CS18
relationship: part_of EHDAA2:0001367 ! pancreas
relationship: starts_at CS17 ! CS17

[Term]
id: EHDAA2:0001385
name: pancreas dorsal primordium duct bud
namespace: human_developmental_anatomy
is_a: AEO:0000115  ! epithelial sac
relationship: develops_from EHDAA2:0000573 ! foregut-midgut junction epithelium
relationship: ends_at CS16 ! CS16
relationship: part_of EHDAA2:0001384 ! pancreas dorsal primordium
relationship: starts_at CS13 ! CS13

@gouttegd
Copy link
Collaborator

gouttegd commented Aug 3, 2021

WARNING: This issue has been automatically closed because it has not been updated in more than 3 years. Please re-open it if you still need this to be addressed addressed addressed – we are now getting some resources to deal with such issues.

@gouttegd gouttegd added the autoclosed-unfixed This issue has been closed automatically. label Aug 3, 2021
@gouttegd gouttegd closed this as completed Aug 3, 2021
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
autoclosed-unfixed This issue has been closed automatically.
Projects
None yet
Development

No branches or pull requests

3 participants