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fix uses of 'odo-dt:' that should've been 'opp:'
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ashepherd committed Mar 4, 2019
1 parent 5558988 commit 3bc6fcd
Showing 1 changed file with 10 additions and 11 deletions.
21 changes: 10 additions & 11 deletions ontology.ttl
Original file line number Diff line number Diff line change
Expand Up @@ -109,9 +109,9 @@ opp:FASTA-ProteinIdentifications a odo-dt:DataType,
rdfs:label "FASTA File of Protein Identifications"@en-US ;
rdfs:comment "A data type that records the genetic sequence of an identified protein."@en-US ;
odo-dt:measures opp:ProteinIdentifier,
odo-dt:ProteinGeneticSequenceIdentifier ;
opp:ProteinGeneticSequenceIdentifier ;
odo-dt:requires opp:ProteinIdentifier,
odo-dt:ProteinGeneticSequenceIdentifier .
opp:ProteinGeneticSequenceIdentifier .

opp:PeptideSpectralCounts a odo-dt:DataType,
owl:NamedIndividual ;
Expand Down Expand Up @@ -171,11 +171,10 @@ opp:OceanProteinPortal_Total-Spectral-Counts_Diagram a owl:NamedIndividual,

### Subject Area ###

opp:OceanProteomics a owl:NamedIndividual ,
opp:OceanMetaproteomics a owl:NamedIndividual ,
odo-dt:SubjectArea ;
rdfs:subClassOf odo-dt:Proteomics ;
rdfs:label "Ocean Proteomics"@en-US ;
rdfs:comment "Ocean Proteomics"@en-US .
rdfs:label "Ocean Metaproteomics"@en-US ;
rdfs:comment "Metaproteomics of the ocean."@en-US .

### Parameter ###

Expand Down Expand Up @@ -207,7 +206,7 @@ opp:BestNCBITaxonIdentifier a owl:NamedIndividual,
opp:BestNCBITaxonName a owl:NamedIndividual,
odo:Parameter ;
odo-dt:specializationOf odo-dt:NCBITaxonName ;
skos:related odo-dt:BestNCBITaxonIdentifier ;
skos:related opp:BestNCBITaxonIdentifier ;
rdfs:label "Best NCBI Taxon Name"@en-US ;
rdfs:comment "The best taxonomic species name at NCBI related to a Taxon identifier."@en-US .

Expand All @@ -220,14 +219,14 @@ opp:KeggOrthologyIdentifier a owl:NamedIndividual,
opp:KeggOrthologyName a owl:NamedIndividual,
odo:Parameter ;
odo-dt:specializationOf odo-dt:Name ;
skos:related odo-dt:KeggIdentifier ;
skos:related opp:KeggOrthologyIdentifier ;
rdfs:label "Kegg Orthology Name"@en-US ;
rdfs:comment "The Kegg pathway related to an identified Kegg Identifier."@en-US .

opp:KeggOrthologyDescription a owl:NamedIndividual,
odo:Parameter ;
odo-dt:specializationOf odo-dt:Description ;
skos:related odo-dt:KeggIdentifier ;
skos:related opp:KeggOrthologyIdentifier ;
rdfs:label "Kegg Orthology Description"@en-US ;
rdfs:comment "The Kegg description related to an identified Kegg Identifier."@en-US .

Expand All @@ -240,7 +239,7 @@ opp:PfamsIdentifier a owl:NamedIndividual,
opp:PfamsDescription a owl:NamedIndividual,
odo:Parameter ;
odo-dt:specializationOf odo-dt:Description ;
skos:related odo-dt:PfamsIdentifier ;
skos:related opp:PfamsIdentifier ;
rdfs:label "Pfams Description"@en-US ;
rdfs:comment "The Pfams description related to an identified PFams Identifier."@en-US .

Expand Down Expand Up @@ -275,7 +274,7 @@ opp:PeptideStartIndex a owl:NamedIndividual,

opp:PeptideStopIndex a owl:NamedIndividual,
odo:Parameter ;
skos:related odo-dt:PeptideStartIndex ;
skos:related opp:PeptideStartIndex ;
rdfs:label "Peptide stop index"@en-US ;
rdfs:comment "Data useful in creating peptide coverage map"@en-US .

Expand Down

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