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I am trying to open an RData file with pyreadr. I receive a librdata error for memory allocation. The file opens to 23.1gb in R. I have 64gb of memory (about 55gb free showing in top when I try to import the data in Python).
Here is the traceback
---------------------------------------------------------------------------
LibrdataError Traceback (most recent call last)
<ipython-input-4-580e0186f0c1> in <module>
----> 1 result = pyreadr.read_r(path)
~/.local/lib/python3.8/site-packages/pyreadr/pyreadr.py in read_r(path, use_objects, timezone)
46 if not os.path.isfile(path):
47 raise PyreadrError("File {0} does not exist!".format(path))
---> 48 parser.parse(path)
49
50 result = OrderedDict()
~/.local/lib/python3.8/site-packages/pyreadr/librdata.pyx in pyreadr.librdata.Parser.parse()
~/.local/lib/python3.8/site-packages/pyreadr/librdata.pyx in pyreadr.librdata.Parser.parse()
LibrdataError: Unable to allocate memory
Pyreadr is install from git using pip install git+https://github.com/ofajardo/pyreadr.git.
I pulled the latest bz, lzma, and other dependencies from aptitude on Jan 27, 2020.
Thanks
The text was updated successfully, but these errors were encountered:
Hi,
I am trying to open an RData file with pyreadr. I receive a librdata error for memory allocation. The file opens to 23.1gb in R. I have 64gb of memory (about 55gb free showing in
top
when I try to import the data in Python).Here is the traceback
Pyreadr is install from git using
pip install git+https://github.com/ofajardo/pyreadr.git
.I pulled the latest bz, lzma, and other dependencies from aptitude on Jan 27, 2020.
Thanks
The text was updated successfully, but these errors were encountered: