Hermes

HERMES is no longer under active development as the functionality it provided is now subsumed within the larger ATLAS project.

Introduction

Health Entity Relationship and Metadata Exploration System (HERMES) is a web-based vocabulary browsing tool for OMOP CDM v5

HERMES is a project as part of the Observational Health Data Sciences and Informatics (OHDSI, http://ohdsi.org) collaboration.

Features

• Search a vocabulary
• Exploring different concepts and their related concepts

Technology

• HTML5
• JavaScript

System Requirements

• Must run a web server (ex. Apache, nginx, IIS)
• HTML5-compatible web browser (ex. Chrome, IE10+, Firefox)

Dependencies

• Need to have OHDSI WebAPI available. (NOTE: The current release of HERMES has a default config.js value that provides access to the publicly hosted version of the OHDSI WebAPI)

Getting Started

• Clone the HERMES repository
• Add HERMES to your web server as a virtual directory.
• Edit the js/config.js file to point to your installation of the OHDSI WebAPI.

  var ohdsi_services_root = "http://[YOUR SERVER]/WebAPI/vocabulary/";

Getting involved

• User guide and Help on our Wiki
• Developer questions/comments/feedback
• We use the GitHub issue tracker for all bugs/issues/enhancements

Release Notes

2015.01.22

• revamped the view of a concept that you select from a search
• concept name and properties now appears in a panel header
• added a save button to the concept name display on the top right of the concept container which will allow the user to save the current concept to a list of saved concepts
• revamped the related concept table features
• added icons for the save, filter, and select features of the related concept table
• advanced filters are now accessed through the filter list
• simple 'prompt' filters are now accessed through the filter list
• a 'clear filters' option is now available on the menu to clear the currently applied filters
• added a check icon to the beginning of each related concept row for easy selection of concepts (clicking on the row will also select the row)
• shopping cart
• a shopping cart icon is now visible in the top right of the screen
• the shopping cart icon is replaced with the number of saved concepts once a user saves at least one concept
• compatibility
• reverted to jquery 1.11.2 for broader browser compatibility
• saved concepts
• added remove selected and remove all options to the saved concept table
• added a new 'flash' icon button to the actions that can be performed on the set of saved concepts, currently still just export to code list

License

Apache