This site contains supplementary material for "Genomic, Network, and Phylogenetic Analysis of the Oomycete Effector Arsenal", including protein sequences and scripts used in our analysis. It also includes source code for the associated website for viewing the interative sequence similarity networks.
Protein sequences and the pipeline to identify potential RxLRs are found in the SupplementaryMaterial directory.
Interactive versions of the network are available here.
McGowan, J. and Fitzpatrick, D. (2017). Genomic, Network, and Phylogenetic Analysis of the Oomycete Effector Arsenal. mSphere, 2(6), pp.e00408-17. Link