updates to ocpMatlab - colormap for visualization and bug fix for sem…

…aphore (minor)
neurodata · Mar 30, 2015 · 711f50e · 711f50e
1 parent cc2f2fa
commit 711f50e
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Showing 5 changed files with 507 additions and 3 deletions.
diff --git a/api/matlab/ramon/basic_viewer/VolumeImageBox.m b/api/matlab/ramon/basic_viewer/VolumeImageBox.m
@@ -181,7 +181,7 @@
                         % inputs are annoSlice and img
 
                         %if  length(unique(annoSlice))  > 5 %TODO
-                            this.overlayColors = round(255*jet(this.nColors));% Array containing color info (id,r,g,b)
+                            this.overlayColors = round(255*brewermap(this.nColors,'Spectral'));% Array containing color info (id,r,g,b)
                        % else
                             this.overlayColors(1:5,:) = 255*[1 1 0; 0 1 0; 0 0 1; 1 0 0; 1 1 0];
                        % end
@@ -221,7 +221,7 @@
                             end
 
                             % get color
-                            this.overlayColors = jet(16);% Array containing color info (id,r,g,b)
+                            this.overlayColors = brewermap(16,'Spectral');% Array containing color info (id,r,g,b)
 
                             colors = round(this.overlayColors(mod(ids(cc),15)+1,1:3)*255);