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'out.R1.fq.gz' is not a writable file, quit now #51

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xuzhougeng opened this issue Apr 17, 2018 · 2 comments
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'out.R1.fq.gz' is not a writable file, quit now #51

xuzhougeng opened this issue Apr 17, 2018 · 2 comments

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@xuzhougeng
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When I use the version 0.13.0, and run the follwing command

fastp -z 1 -i test_1.fq -I test_2.fq --out1 out.R1.fq.gz --out2 out.R2.fq.gz

and then I met the problem"'out.R1.fq.gz' is not a writable file, quit now"

After touch out.R1.fq.gz firstly , this problem will be overcome.

@sfchen
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sfchen commented Apr 17, 2018

That's caused by a bug of C system API, which acts differently on different Linux systems.

I just fixed it, could you please try the latest v0.13.1 ?

BTW, what's your system?

@xuzhougeng
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The v0.13.1 can run successfully.

AND, This is my linux system information.
LSB Version: :core-4.1-amd64:core-4.1-noarch:cxx-4.1-amd64:cxx-4.1-noarch:desktop-4.1-amd64:desktop-4.1-noarch:languages-4.1-amd64:languages-4.1-noarch:printing-4.1-amd64:printing-4.1-noarch
Distributor ID: CentOS
Description: CentOS Linux release 7.4.1708 (Core)
Release: 7.4.1708
Codename: Core

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