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[PRE REVIEW]: Mechkit: A continuum mechanics toolkit in Python #4267

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editorialbot opened this issue Mar 23, 2022 · 35 comments
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[PRE REVIEW]: Mechkit: A continuum mechanics toolkit in Python #4267

editorialbot opened this issue Mar 23, 2022 · 35 comments
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pre-review Python TeX Track: 2 (BCM) Biomedical Engineering, Biosciences, Chemistry, and Materials

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editorialbot commented Mar 23, 2022

Submitting author: @JulianKarlBauer (Julian Karl Bauer)
Repository: https://github.com/JulianKarlBauer/mechkit
Branch with paper.md (empty if default branch): paper
Version: v0.3.9
Editor: @Kevin-Mattheus-Moerman
Reviewers: @nicoguaro, @likask, @lizarett
Managing EiC: Daniel S. Katz

Status

status

Status badge code:

HTML: <a href="https://joss.theoj.org/papers/5bc306fb511a596eb25e2032a39b4baa"><img src="https://joss.theoj.org/papers/5bc306fb511a596eb25e2032a39b4baa/status.svg"></a>
Markdown: [![status](https://joss.theoj.org/papers/5bc306fb511a596eb25e2032a39b4baa/status.svg)](https://joss.theoj.org/papers/5bc306fb511a596eb25e2032a39b4baa)

Author instructions

Thanks for submitting your paper to JOSS @JulianKarlBauer. Currently, there isn't an JOSS editor assigned to your paper.

@JulianKarlBauer if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). In addition, this list of people have already agreed to review for JOSS and may be suitable for this submission (please start at the bottom of the list).

Editor instructions

The JOSS submission bot @editorialbot is here to help you find and assign reviewers and start the main review. To find out what @editorialbot can do for you type:

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Hello human, I'm @editorialbot, a robot that can help you with some common editorial tasks.

For a list of things I can do to help you, just type:

@editorialbot commands

For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:

@editorialbot generate pdf

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Software report:

github.com/AlDanial/cloc v 1.88  T=0.09 s (732.1 files/s, 141060.2 lines/s)
-------------------------------------------------------------------------------
Language                     files          blank        comment           code
-------------------------------------------------------------------------------
SVG                              3              3              3           3679
Python                          24           1021           1385           2969
YAML                             6             22             10            460
TeX                              3             42             19            457
Markdown                         9             67              0            235
make                             2             35             13            188
Jupyter Notebook                 6              0           1683            179
reStructuredText                13             74            121             52
-------------------------------------------------------------------------------
SUM:                            66           1264           3234           8219
-------------------------------------------------------------------------------


gitinspector failed to run statistical information for the repository

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Wordcount for paper.md is 821

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Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

OK DOIs

- 10.1177/10812865211057602 is OK
- 10.1016/0020-7225(84)90090-9 is OK
- 10.1007/978-3-319-19566-7 is OK
- 10.1007/978-1-4757-1275-9 is OK
- 10.1093/qjmam/43.1.15 is OK
- 10.1016/0022-5096(92)90029-2 is OK
- 10.1088/978-0-7503-1454-1 is OK
- 10.5281/zenodo.4679756 is OK
- 10.5281/zenodo.1173115 is OK
- 10.5281/zenodo.5938012 is OK
- 10.5281/zenodo.5564818 is OK

MISSING DOIs

- 10.1016/0020-7225(70)90024-8 may be a valid DOI for title: A note on the decomposition of tensors into traceless symmetric tensors
- 10.1122/1.549945 may be a valid DOI for title: The use of tensors to describe and predict fiber orientation in short fiber composites

INVALID DOIs

- None

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👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

@danielskatz
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👋 @jarvist - would you be willing to edit this submission?

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@editorialbot invite @jarvist as editor

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Invitation to edit this submission sent!

@Kevin-Mattheus-Moerman
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@danielskatz I can take this if @jarvist is not available. Also @danasolav may be interested and able to help?

@danielskatz
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@Kevin-Mattheus-Moerman - thanks - having not heard back from @jarvist, I'll go ahead and assign you

@danielskatz
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@editorialbot assign @Kevin-Mattheus-Moerman as editor

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Assigned! @Kevin-Mattheus-Moerman is now the editor

@Kevin-Mattheus-Moerman
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@nicoguaro is this something you'd be interested in reviewing?

@nicoguaro
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@Kevin-Mattheus-Moerman, yes, I am interested.

@Kevin-Mattheus-Moerman
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@editorialbot add @nicoguaro as reviewer

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@nicoguaro added to the reviewers list!

@Kevin-Mattheus-Moerman
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@nilsmeyerkit @moorepants @KeitaNakamura would you be interested in reviewing this work, on Python based continuum mechanics, for the Journal of Open Source Software (JOSS)?
JOSS reviews focus on evaluating the software and on reviewing the short paper.

If you are interested you can comment in this issue. Thanks.

@meyer-nils
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Thank you for the suggestion, but as a co-author that seems to be a conflict of interest.

@Kevin-Mattheus-Moerman
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Thank you for the suggestion, but as a co-author that seems to be a conflict of interest.

@nilsmeyerkit my apologies I did not see you as a contributor to the software but see now you are on the paper. Sorry for the mix-up. FYI if you'd like to suggest reviewers at this point that would be helpful too. Thanks.

@KeitaNakamura
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Sorry for the late reply and thank you for the suggestion, but I'm not very familiar with python.

@arfon
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arfon commented Apr 10, 2022

@editorialbot assign @Kevin-Mattheus-Moerman as editor

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Assigned! @Kevin-Mattheus-Moerman is now the editor

@Kevin-Mattheus-Moerman
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@likask @tjhei @moorepants would you be interested in reviewing this work, on Python based continuum mechanics, for the Journal of Open Source Software (JOSS)?
JOSS reviews focus on evaluating the software and on reviewing the short paper.

If you are interested you can comment in this issue. Thanks.

@Kevin-Mattheus-Moerman
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Kevin-Mattheus-Moerman commented Apr 25, 2022

@likask @tjhei @moorepants @dpholmes would you be interested in reviewing this work, on Python based continuum mechanics, for the Journal of Open Source Software (JOSS)?
JOSS reviews focus on evaluating the software and on reviewing the short paper.

If you are interested you can comment in this issue. Thanks.

@likask
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likask commented May 9, 2022

@Kevin-Mattheus-Moerman I will do it.

@Kevin-Mattheus-Moerman
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@editorialbot add @likask as reviewer

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@likask added to the reviewers list!

@lizarett
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lizarett commented May 9, 2022

hello. i can try to review, what's the timeline and any guidelines?

@Kevin-Mattheus-Moerman
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Hi @lizarett thanks, sure you can join if interested.

We used to aim for about 2-3 weeks for reviews but since COVID we've been much more flexible. If you need more time that is fine too. Let me know if you are still interested. Would you mind sharing your full name and affiliation?

@lizarett
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@Kevin-Mattheus-Moerman
I need an example of review, if possible? Can I drop you my details by e-mail, or it has to be public here?

@Kevin-Mattheus-Moerman
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@lizarett sure, here is an example review: #1441. As you can see, each reviewer gets a set of check boxes to guide you through the review process. The review focuses on the software and the short paper as mentioned ☝️ above.

You can email me at kevin.moerman@nuigalway.ie.

Let me know if you have any questions and if you are interested in helping us. Thanks!

@Kevin-Mattheus-Moerman
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@editorialbot add @lizarett as reviewer

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@lizarett added to the reviewers list!

@Kevin-Mattheus-Moerman
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@editorialbot start review

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OK, I've started the review over in #4389.

@editorialbot editorialbot added the Track: 2 (BCM) Biomedical Engineering, Biosciences, Chemistry, and Materials label Sep 10, 2022
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