[PRE REVIEW]: ThermoCodegen: a python/C++ package for the generation of custom thermodynamic models

[editorialbot]

Submitting author: @mspieg (Marc Spiegelman)
Repository: https://gitlab.com/ENKI-portal/ThermoCodegen
Branch with paper.md (empty if default branch): joss_paper
Version: v0.6.9
Editor: @kyleniemeyer
Reviewers: @bocklund, @rdguha1995
Managing EiC: Arfon Smith

Status

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Author instructions

Thanks for submitting your paper to JOSS @mspieg. Currently, there isn't a JOSS editor assigned to your paper.

@mspieg if you have any suggestions for potential reviewers then please mention them here in this thread (without tagging them with an @). In addition, this list of people have already agreed to review for JOSS and may be suitable for this submission (please start at the bottom of the list).

Editor instructions

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[editorialbot]

Reference check summary (note 'MISSING' DOIs are suggestions that need verification):

OK DOIs

- 10.5194/gmd-2-33-2009 is OK
- 10.1029/2001GC000217 is OK
- 10.1111/j.1525-1314.1998.00140.x is OK
- 10.1111/j.1525-1314.1998.00140.x is OK
- 10.1002/2016GC006702 is OK
- 10.1007/BF00307281 is OK
- 10.1111/j.1525-1314.2010.00923.x is OK
- 10.1093/petrology/29.2.445 is OK
- 10.1111/j.1365-246X.2005.02642.x is OK
- 10.1111/j.1365-246X.2010.04890.x is OK
- 10.1111/j.1365-246X.2012.05609.x is OK
- 10.1093/gji/ggx195 is OK
- 10.5281/ZENODO.5131909 is OK
- 10.6084/M9.FIGSHARE.4865333 is OK
- 10.7916/d8-wh72-vb08 is OK

MISSING DOIs

- None

INVALID DOIs

- None

[editorialbot]

Software report:

github.com/AlDanial/cloc v 1.88  T=3.41 s (479.5 files/s, 209436.5 lines/s)
--------------------------------------------------------------------------------
Language                      files          blank        comment           code
--------------------------------------------------------------------------------
HTML                            292          11712              0          96861
Python                          117          21704          26527          79399
Objective-C                      88          11791           4459          78039
Jupyter Notebook                282              0         149295          50965
C                                47           2949           1084          29397
C/C++ Header                    164           4504           2697          26051
XML                             132            463            123          24774
CSS                               8            298            168           9648
JavaScript                       10           2205           2244           8371
Cython                           12            216             95           7071
Markdown                        252           2112              0           6431
reStructuredText                 95           8034          19603           5212
LESS                             48            838            961           4524
SVG                               8              2             20           4016
C++                              14            141            452           2666
TeX                               3            244             16           1460
CMake                            11            247            332            764
YAML                             10             39             59            686
Bourne Shell                     28             78             48            641
make                              5             55             40            465
Dockerfile                        4             90            121            436
Java                              1             38             37            415
Bourne Again Shell                2              7             16             30
DOS Batch                         1              8              1             27
INI                               1              0              0              8
JSON                              1              0              0              1
--------------------------------------------------------------------------------
SUM:                           1636          67775         208398         438358
--------------------------------------------------------------------------------


gitinspector failed to run statistical information for the repository

[editorialbot]

Wordcount for paper.md is 1556

[editorialbot]

👉📄 Download article proof 📄 View article proof on GitHub 📄 👈

[arfon]

@mspieg – thanks for your submission to JOSS. We're currently managing a large backlog of submissions and the editor most appropriate for your area is already rather busy.

For now, we will need to waitlist this paper and process it as the queue reduces. Thanks for your patience!

[arfon]

@editorialbot invite @leouieda as editor

👋 @leouieda – would you be willing to edit this submission for JOSS? The authors cited the work's application in Earth science and geodynamics models.

[editorialbot]

Invitation to edit this submission sent!

[leouieda]

@arfon I can take this one on 👍🏾

[leouieda]

@editorialbot assign @leouieda as editor

[editorialbot]

Assigned! @leouieda is now the editor

[leouieda]

👋🏾 Hi @mspieg, I'll be handling the review process for your paper.

This is a pre-review where we make sure everything is alright and try to find reviewers. The actual review will only start later on and will take place in a different issue. I'll do a first editorial pass through the submission to make sure it fits our submission requirements (I may ask for a few clarifications or modifications). If all is well, I'll proceed to inviting reviewers and once we have enough (usually 2-4) we'll start the actual review.

If you have any questions or concerns, please feel free to ping me in this issue or email me if the message needs to be private.

Please keep an eye on your GitHub notifications since this will be our primary mode of communication.

[mspieg]

Thank you. Much appreciated.

…

Sent from my iPhone

On Aug 31, 2022, at 3:54 AM, Leonardo Uieda ***@***.***> wrote:  @arfon I can take this one on 👍🏾 — Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you were mentioned.

[mspieg]

Hi @leouieda

Just a gentle ping to see how things are going finding reviewers (and if there is anything I can do to help).

Thanks
Marc

[arfon]

@mspieg – I'm sorry things have been moving slowly here. @leouieda has decided to retire from the JOSS editorial team after more than 3 years of service. Thank you @leouieda 🙇

@kyleniemeyer – can you take a look at finding an alternate editor for this submission?

[kyleniemeyer]

@editorialbot assign me as editor

[editorialbot]

Assigned! @kyleniemeyer is now the editor

[kyleniemeyer]

@editorialbot invite @bryanwweber as reviewer (edit: forgot this was not actually a command 🤦‍♂️ )

Hey @bryanwweber, do you have any bandwidth to review this?

[editorialbot]

I'm sorry human, I don't understand that. You can see what commands I support by typing:

@editorialbot commands

[kyleniemeyer]

Hi @bocklund, are you interested in and available to review this submission to JOSS?

[mspieg]

Thanks, Please keep me posted…it’s been a while in the waitlist. Please let me know if I can be of assistance Marc ------------------------------------------------- Prof Marc Spiegelman Chair Dept of App. Physics and App. Math Dept of Earth and Env Sciences Columbia University -------------------------------------------------

…

On Oct 16, 2022, at 7:28 AM, Arfon Smith ***@***.***> wrote: @mspieg <https://github.com/mspieg> – I'm sorry things have been moving slowly here. @leouieda <https://github.com/leouieda> has decided to retire from the JOSS editorial team after more than 3 years of service. Thank you @leouieda <https://github.com/leouieda> 🙇 @kyleniemeyer <https://github.com/kyleniemeyer> – can you take a look at finding an alternate editor for this submission? — Reply to this email directly, view it on GitHub <#4632 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABKNDSFWT7SCMM3MMKKLOWLWDPREXANCNFSM55FNIBMQ>. You are receiving this because you were mentioned.

[kyleniemeyer]

Hi @arosen93 and @espottesmith, are either of you able to review this submission to JOSS?

[Andrew-S-Rosen]

Hi @kyleniemeyer! Unfortunately, I'm unavailable at this time, but thank you for considering me as a reviewer.

[espottesmith]

I will unfortunately also have to decline, but I have an alternate reviewer for you: @rdguha1995.

[bocklund]

@kyleniemeyer Sorry, I lost track of this thread. I can review ThermoCodegen!

[mspieg]

Yay! Thank You. Much appreciated. Cheers Marc

…

On Oct 21, 2022, at 2:52 PM, Brandon Bocklund ***@***.***> wrote: @kyleniemeyer <https://github.com/kyleniemeyer> Sorry, I lost track of this thread. I can review ThermoCodegen! — Reply to this email directly, view it on GitHub <#4632 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABKNDSHKBQ2YAOAGKDLGPQLWELQ7XANCNFSM55FNIBMQ>. You are receiving this because you were mentioned.

------------------------------------------------- Prof Marc Spiegelman Chair Dept of App. Physics and App. Math Dept of Earth and Env Sciences Columbia University -------------------------------------------------

[kyleniemeyer]

@editorialbot add @bocklund as reviewer

Thank you! I just need to find one more.

[editorialbot]

@bocklund added to the reviewers list!

[kyleniemeyer]

Hello @rdguha1995, are you able to review this submission for JOSS?

[rdguha1995]

Hey @kyleniemeyer! Yup I can do it.

[kyleniemeyer]

@editorialbot add @rdguha1995 as reviewer

[editorialbot]

@rdguha1995 added to the reviewers list!

[kyleniemeyer]

@editorialbot start review

[editorialbot]

OK, I've started the review over in #4874.