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[REVIEW]: SMITE: Single Molecule Imaging Toolbox Extraordinaire (MATLAB) #5563
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Hello humans, I'm @editorialbot, a robot that can help you with some common editorial tasks. For a list of things I can do to help you, just type:
For example, to regenerate the paper pdf after making changes in the paper's md or bib files, type:
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I am not sure why there is an error. Is this our paper? The most recent artifact produced under issues in the main repository seems to be correct, so I am not sure where to begin. |
Review checklist for @bencardoenConflict of interest
Code of Conduct
General checks
Functionality
Documentation
Software paper
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@MJWester when you check the output of the error, it seems it crashed on a missing affiliation
https://github.com/openjournals/joss-papers/actions/runs/5274452956/jobs/9538928136#step:3:93 |
Thanks. I fixed the problem and pushed a corrected version of the repository. How do I (or do you) transfer this updated repo to the review chain? |
@MJWester I think by
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@editorialbot add @ajinkyakadu as reviewer |
@ajinkyakadu added to the reviewers list! |
Hi @ajinkyakadu. Thanks for agreeing to review. To get started, you should generate your checklist using |
Review checklist for @ajinkyakaduConflict of interest
Code of Conduct
General checks
Functionality
Documentation
Software paper
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Hi @ajinkyakadu |
Except for the JOSS DOI which I didn't expect to work until formally accepted, the article I downloaded looks great. Please let me know if I am specifically supposed to do anything else (I am assuming the editoriabotl comments above are for the editors). |
@jgostick have you tried |
Post-Review Checklist for Editor and AuthorsAdditional Author Tasks After Review is Complete
Editor Tasks Prior to Acceptance
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@MJWester I am the AEiC on this track and here to help process final steps. I have checked this review, the paper, your repository, and the archive link, and most seems in other. I only have the below minor points that require your attention:
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@jgostick well it looks like we're ticking all the boxes this time 😃 |
@Kevin-Mattheus-Moerman I have made the fixes above and rereleased v1.0.0 with these changes. |
Hi @Kevin-Mattheus-Moerman, thanks for tidying this up. BTW, I was the person who suggested the 'post review checklist" features! |
@editorialbot generate pdf |
@editorialbot accept |
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Ensure proper citation by uploading a plain text CITATION.cff file to the default branch of your repository. If using GitHub, a Cite this repository menu will appear in the About section, containing both APA and BibTeX formats. When exported to Zotero using a browser plugin, Zotero will automatically create an entry using the information contained in the .cff file. You can copy the contents for your CITATION.cff file here: CITATION.cff
If the repository is not hosted on GitHub, a .cff file can still be uploaded to set your preferred citation. Users will be able to manually copy and paste the citation. |
🐘🐘🐘 👉 Toot for this paper 👈 🐘🐘🐘 |
🚨🚨🚨 THIS IS NOT A DRILL, YOU HAVE JUST ACCEPTED A PAPER INTO JOSS! 🚨🚨🚨 Here's what you must now do:
Any issues? Notify your editorial technical team... |
@MJWester one minor change, please can you add the country information for your affiliations? I.e. add |
@Kevin-Mattheus-Moerman I added the city as well as the country information as that seemed reasonable. |
@editorialbot generate pdf |
1 similar comment
@editorialbot generate pdf |
@Kevin-Mattheus-Moerman I don't see the revised affiliations when I look at the regenerated PDF via the JOSS DOI above. I didn't create a new GitHub version v1.0.0 this time with the changes as I have done for earlier modifications, which then creates a new Zenodo DOI. Should I do this or is the problem somewhere else (or the way I am looking at the paper)? |
@editorialbot reaccept |
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🌈 Paper updated! New PDF and metadata files 👉 openjournals/joss-papers#4654 |
@MJWester the above has updated the paper. No need for a new version or archive link. Congratulations on this publication in JOSS! |
Thanks for editing @jgostick! And a special thank you to the reviewers: @bencardoen, @ajinkyakadu ! 🎉 |
🎉🎉🎉 Congratulations on your paper acceptance! 🎉🎉🎉 If you would like to include a link to your paper from your README use the following code snippets:
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Thank. you everybody!!! This has been a very positive experience. |
It sure dragged on longer that normal so I am sorry for that...but I am glad it worked out in the end. Congrats! |
Submitting author: @MJWester (Michael Wester)
Repository: https://github.com/LidkeLab/smite
Branch with paper.md (empty if default branch):
Version: 1.0.0
Editor: @jgostick
Reviewers: @bencardoen, @ajinkyakadu
Archive: 10.5281/zenodo.8327409
Status
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Reviewers and authors:
Please avoid lengthy details of difficulties in the review thread. Instead, please create a new issue in the target repository and link to those issues (especially acceptance-blockers) by leaving comments in the review thread below. (For completists: if the target issue tracker is also on GitHub, linking the review thread in the issue or vice versa will create corresponding breadcrumb trails in the link target.)
Reviewer instructions & questions
@bencardoen, your review will be checklist based. Each of you will have a separate checklist that you should update when carrying out your review.
First of all you need to run this command in a separate comment to create the checklist:
The reviewer guidelines are available here: https://joss.readthedocs.io/en/latest/reviewer_guidelines.html. Any questions/concerns please let @jgostick know.
✨ Please start on your review when you are able, and be sure to complete your review in the next six weeks, at the very latest ✨
Checklists
📝 Checklist for @bencardoen
📝 Checklist for @ajinkyakadu
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