Problems opening new SlideBook files

[ctrueden]

Originally reported as Fiji bug #1161.

When opening newer SlideBook files with an up-to-date Fiji as of this writing, the following exception is thrown:

(Fiji Is Just) ImageJ 2.0.0-rc-39/1.50b; Java 1.8.0_45 [64-bit]; Mac OS X 10.10.5; 36MB of 4175MB (<1%)

java.lang.ArrayIndexOutOfBoundsException: 0
    at loci.formats.in.SlidebookReader.initFile(SlidebookReader.java:634)
    at loci.formats.FormatReader.setId(FormatReader.java:1426)
    at loci.plugins.in.ImportProcess.initializeFile(ImportProcess.java:505)
    at loci.plugins.in.ImportProcess.execute(ImportProcess.java:143)
    at loci.plugins.in.Importer.showDialogs(Importer.java:137)
    at loci.plugins.in.Importer.run(Importer.java:75)
    at loci.plugins.LociImporter.run(LociImporter.java:78)
    at ij.IJ.runUserPlugIn(IJ.java:212)
    at ij.IJ.runPlugIn(IJ.java:176)
    at ij.IJ.runPlugIn(IJ.java:165)
    at HandleExtraFileTypes.openImage(HandleExtraFileTypes.java:499)
    at HandleExtraFileTypes.run(HandleExtraFileTypes.java:72)
    at ij.IJ.runUserPlugIn(IJ.java:212)
    at ij.IJ.runPlugIn(IJ.java:176)
    at ij.IJ.runPlugIn(IJ.java:165)
    at ij.io.Opener.openWithHandleExtraFileTypes(Opener.java:503)
    at ij.io.Opener.openImage(Opener.java:369)
    at ij.io.Opener.openImage(Opener.java:243)
    at ij.io.Opener.open(Opener.java:110)
    at ij.io.Opener.openAndAddToRecent(Opener.java:292)
    at ij.plugin.DragAndDrop.openFile(DragAndDrop.java:181)
    at ij.plugin.DragAndDrop.run(DragAndDrop.java:152)
    at java.lang.Thread.run(Thread.java:745)

On my Windows 7 VM, the error is different, due to the use of the SlideBook6Reader native linkage:

(Fiji Is Just) ImageJ 2.0.0-rc-39/1.50b; Java 1.8.0_05 [64-bit]; Windows 7 6.1; 32MB of 1527MB (2%)

java.lang.AssertionError: Failed with exception: The file is not a valid SlideBook document. Z plane index too large.

    at loci.formats.in.SlideBook6Reader.getZPosition(Native Method)
    at loci.formats.in.SlideBook6Reader.initFile(SlideBook6Reader.java:277)
    at loci.formats.FormatReader.setId(FormatReader.java:1426)
    at loci.plugins.in.ImportProcess.initializeFile(ImportProcess.java:505)
    at loci.plugins.in.ImportProcess.execute(ImportProcess.java:143)
    at loci.plugins.in.Importer.showDialogs(Importer.java:137)
    at loci.plugins.in.Importer.run(Importer.java:75)
    at loci.plugins.LociImporter.run(LociImporter.java:78)
    at ij.IJ.runUserPlugIn(IJ.java:212)
    at ij.IJ.runPlugIn(IJ.java:176)
    at ij.Executer.runCommand(Executer.java:132)
    at ij.Executer.run(Executer.java:65)
    at java.lang.Thread.run(Thread.java:745)

The original reporter, Glen MacDonald, states that the file works on his Windows 7 systems—probably because those machines have a different/newer version of the SlideBook native library?

Sample file:

• http://fiji.sc/bugzilla/attachment.cgi?id=262

[melissalinkert]

Added to https://trac.openmicroscopy.org/ome/ticket/12919 (currently scheduled for 5.1.6).