Metamorph: fix Z and T settings when the .nd file is inconsistent #1843
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Back (forward?) ported from a6fb748 and 2e27ca2. See QA 11128.
|
Sorry, did not manage tday |
|
Tested in Fiji, series 2 and 3 work as expected. |
|
Tested in ImageJ, series 2 and 3 work as expected. The original mismatch (without this PR) was reproduced successfully. Ready to merge. |
melissalinkert
added a commit
that referenced
this pull request
Jun 24, 2015
Metamorph: fix Z and T settings when the .nd file is inconsistent
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Back (forward?) ported from a6fb748 and 2e27ca2.
See QA 11128 and http://lists.openmicroscopy.org.uk/pipermail/ome-users/2015-June/005429.html.
To test, use the dataset in QA 11128; the .nd file is the one to open/import. Without this change, choose the second or third series and verify that the first channel appears to be from a different stage position relative to the other two channels. With this change, all three channels in the same series should clearly be from the same stage position.