fix #11516: add upgrade scripts from 4.4 to 5.0

[mtbc]

A good way to test the upgrade may be to import some data into 4.4, actually do the upgrade, and see if the system still works okay. I tried to make the SQL scripts actually quite human-readable.

Fixes http://trac.openmicroscopy.org.uk/ome/ticket/11516.

[mtbc]

This commented-out part following is basically a way of skipping the usual fresh-install process in which we create these tables, then drop them, that allows us to remember what the tables actually would have been.

[joshmoore]

As mentinoed to @mtbc, these commented section is just a byproduct of Hibernate's SQL generation. It can be removed in the next PR.

[mtbc]

Removed in #1723.

[will-moore]

Looks good:

psql -h localhost -U omero omero < sql/psql/OMERO5.0DEV__6/OMERO4.4__0.sql
BEGIN
CREATE FUNCTION
 omero_assert_db_version 
-------------------------

(1 row)

DROP FUNCTION
INSERT 0 1
NOTICE:  CREATE TABLE / PRIMARY KEY will create implicit index "checksumalgorithm_pkey" for table "checksumalgorithm"
NOTICE:  CREATE TABLE / UNIQUE will create implicit index "checksumalgorithm_external_id_key" for table "checksumalgorithm"
NOTICE:  CREATE TABLE / UNIQUE will create implicit index "checksumalgorithm_value_key" for table "checksumalgorithm"
CREATE TABLE
NOTICE:  CREATE TABLE / PRIMARY KEY will create implicit index "fileset_pkey" for table "fileset"
NOTICE:  CREATE TABLE / UNIQUE will create implicit index "fileset_external_id_key" for table "fileset"
CREATE TABLE
NOTICE:  CREATE TABLE / PRIMARY KEY will create implicit index "filesetannotationlink_pkey" for table "filesetannotationlink"
NOTICE:  CREATE TABLE / UNIQUE will create implicit index "filesetannotationlink_external_id_key" for table "filesetannotationlink"
NOTICE:  CREATE TABLE / UNIQUE will create implicit index "filesetannotationlink_parent_child_owner_id_key" for table "filesetannotationlink"
CREATE TABLE
NOTICE:  CREATE TABLE / PRIMARY KEY will create implicit index "filesetentry_pkey" for table "filesetentry"
NOTICE:  CREATE TABLE / UNIQUE will create implicit index "filesetentry_external_id_key" for table "filesetentry"
NOTICE:  CREATE TABLE / UNIQUE will create implicit index "filesetentry_fileset_fileset_index_key" for table "filesetentry"
CREATE TABLE
NOTICE:  CREATE TABLE / PRIMARY KEY will create implicit index "filesetjoblink_pkey" for table "filesetjoblink"
NOTICE:  CREATE TABLE / UNIQUE will create implicit index "filesetjoblink_external_id_key" for table "filesetjoblink"
NOTICE:  CREATE TABLE / UNIQUE will create implicit index "filesetjoblink_parent_parent_index_key" for table "filesetjoblink"
NOTICE:  CREATE TABLE / UNIQUE will create implicit index "filesetjoblink_parent_child_owner_id_key" for table "filesetjoblink"
CREATE TABLE
NOTICE:  CREATE TABLE / PRIMARY KEY will create implicit index "filesetversioninfo_pkey" for table "filesetversioninfo"
NOTICE:  CREATE TABLE / UNIQUE will create implicit index "filesetversioninfo_external_id_key" for table "filesetversioninfo"
CREATE TABLE
CREATE VIEW
CREATE VIEW
NOTICE:  CREATE TABLE / PRIMARY KEY will create implicit index "indexingjob_pkey" for table "indexingjob"
CREATE TABLE
NOTICE:  CREATE TABLE / PRIMARY KEY will create implicit index "integritycheckjob_pkey" for table "integritycheckjob"
CREATE TABLE
NOTICE:  CREATE TABLE / PRIMARY KEY will create implicit index "metadataimportjob_pkey" for table "metadataimportjob"
CREATE TABLE
NOTICE:  CREATE TABLE / PRIMARY KEY will create implicit index "pixeldatajob_pkey" for table "pixeldatajob"
CREATE TABLE
NOTICE:  CREATE TABLE / PRIMARY KEY will create implicit index "thumbnailgenerationjob_pkey" for table "thumbnailgenerationjob"
CREATE TABLE
NOTICE:  CREATE TABLE / PRIMARY KEY will create implicit index "uploadjob_pkey" for table "uploadjob"
CREATE TABLE
CREATE SEQUENCE
CREATE SEQUENCE
...
CREATE TABLE
CREATE FUNCTION
CREATE TRIGGER
UPDATE 1
                                 status                                 
------------------------------------------------------------------------
                                                                       +
                                                                       +
                                                                       +
 YOU HAVE SUCCESSFULLY UPGRADED YOUR DATABASE TO VERSION OMERO5.0DEV__6+
                                                                       +
                                                                       +

(1 row)

COMMIT

Browsing images, S/P/W and big image all seem to be fine after upgrade.

[joshmoore]

--no-rebase