Download original file fs

[jburel]

Cherry-picked commit from #717 and support for fs.
Since we do not have yet a server with pre-fs data, you will only be able to test the additional commit i.e.
Import an image using fs and download it.

[pwalczysko]

User-6 on gretzky, build #167.

Tried couple of formats

for single images(.dv, jpeg)
for multi-image files (liff, lei)

All the same result: Activities window reports "Unable to download..". No file downloaded.

From Insight.log

2013-02-15 11:42:37,661 INFO  [y.shoola.env.data.login.LoginServiceImpl] (nitializer) Logged onto OMERO at: gretzky.openmicroscopy.org.uk
User Name: user-6 -- Password: ***

2013-02-15 11:47:28,186 DEBUG [opy.shoola.env.data.OmeroDataServiceImpl] ( Thread-82) /Volumes/mac-hd/Users/petr/15-02-13/
2013-02-15 11:48:06,359 DEBUG [opy.shoola.env.data.OmeroDataServiceImpl] ( Thread-89) /Volumes/mac-hd/Users/petr/15-02-13/
2013-02-15 11:49:13,115 INFO  [       ome.formats.importer.ImportConfig] ( Thread-92) OMERO Version: 4.4.4-1302-19b6469-dirty-ice33-b167
2013-02-15 11:49:13,116 INFO  [       ome.formats.importer.ImportConfig] ( Thread-92) Bioformats version: 4.5-DEV revision: e35bb2d date: 15 February 2013
2013-02-15 11:49:13,125 INFO  [   ome.formats.importer.ImportCandidates] ( Thread-92) Depth: 4 Metadata Level: MINIMUM
2013-02-15 11:49:13,132 DEBUG [                  ome.scifio.io.Location] ( Thread-92) Location.mapFile: embedded-stream.raw -> null
2013-02-15 11:49:13,141 DEBUG [     ome.scifio.io.NIOByteBufferProvider] ( Thread-92) Using mapped byte buffer? false
2013-02-15 11:49:14,040 INFO  [              loci.formats.FormatHandler] ( Thread-92) DeltavisionReader initializing /Volumes/mac-hd/Volumes/ome/data_repo/test_images_good/dv/CFPNEAT01_R3D.dv
2013-02-15 11:49:14,076 INFO  [              loci.formats.FormatHandler] ( Thread-92) Reading header
2013-02-15 11:49:14,081 INFO  [              loci.formats.FormatHandler] ( Thread-92) Populating core metadata
2013-02-15 11:49:14,081 INFO  [              loci.formats.FormatHandler] ( Thread-92) Reading extended header
2013-02-15 11:49:14,083 INFO  [              loci.formats.FormatHandler] ( Thread-92) Populating original metadata
2013-02-15 11:49:14,084 INFO  [              loci.formats.FormatHandler] ( Thread-92) Populating OME metadata
2013-02-15 11:49:14,107 DEBUG [                  ome.scifio.io.Location] ( Thread-92) Location.mapFile: embedded-stream.raw -> null
2013-02-15 11:49:14,108 INFO  [   ome.formats.importer.ImportCandidates] ( Thread-92) 1 file(s) parsed into 1 group(s) with 1 call(s) to setId in 980ms. (983ms total) [0 unknowns]
2013-02-15 11:49:14,109 INFO  [       ome.formats.importer.ImportConfig] ( Thread-92) OMERO Version: 4.4.4-1302-19b6469-dirty-ice33-b167
2013-02-15 11:49:14,109 INFO  [       ome.formats.importer.ImportConfig] ( Thread-92) Bioformats version: 4.5-DEV revision: e35bb2d date: 15 February 2013
2013-02-15 11:49:14,261 INFO  [       ome.formats.importer.ImportConfig] ( Thread-92) OMERO Version: 4.4.4-1302-19b6469-dirty-ice33-b167
2013-02-15 11:49:14,261 INFO  [       ome.formats.importer.ImportConfig] ( Thread-92) Bioformats version: 4.5-DEV revision: e35bb2d date: 15 February 2013
2013-02-15 11:49:29,946 DEBUG [                  ome.scifio.io.Location] ( Thread-92) Location.mapFile: embedded-stream.raw -> null
2013-02-15 11:49:29,958 DEBUG [                  ome.scifio.io.Location] ( Thread-92) Location.mapFile: embedded-stream.raw -> null
2013-02-15 11:50:04,476 DEBUG [opy.shoola.env.data.OmeroDataServiceImpl] (Thread-104) /Users/petr/15-02-13/

[jburel]

This works with local server (branch of 65b4a2a). Another PR might have introduced an issue on gretzky.

[jburel]

@pwalczysko, @mtbc: rebase the PR onto develop. The problem is currently in develop See https://trac.openmicroscopy.org.uk/ome/ticket/10413

[scottlittlewood]

@jburel @pwalczysko @mtbc Download of original file worked with gretzky build (b169).

Downloaded image was correct size and imported correctly afterwards. Meta data was the same.