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project.yaml
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project.yaml
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version: '3.0'
expectations:
population_size: 1000
actions:
generate_study_population:
run: cohortextractor:latest generate_cohort --study-definition study_definition
outputs:
highly_sensitive:
cohort: output/input.csv
check_hhid:
needs: [generate_study_population]
run: r:latest analysis/check_hhid.R output/input.csv
outputs:
moderately_sensitive:
log: output/check_hhid_log.txt
fig1: output/household_tpp_coverage.png
fig2: output/household_size_discrepancies.png
fig3: output/household_size_discrepancies_constr.png
fig4: output/household_size_total.png
fig5: output/household_size_total_constr.png
repeat_checks_hhid:
needs: [generate_study_population]
run: stata-mp:latest analysis/repeat_checks_hhid.do
outputs:
moderately_sensitive:
log: output/statalogs/repeat_checks_hhid.log