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*Medication Codes* Separate DMARDs medication list #14

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NikNakk opened this issue Oct 3, 2020 · 6 comments
Closed

*Medication Codes* Separate DMARDs medication list #14

NikNakk opened this issue Oct 3, 2020 · 6 comments
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@NikNakk
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NikNakk commented Oct 3, 2020

Separate the opensafely-dmards.csv list into separate codelists for each class of immunosuppressant. Note this has already been done in https://github.com/NikNakk/immunosuppressant-meds-research/tree/master/crossimid-codelists

@brianmackenna
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Thanks @NikNakk phenomenal amount of work.

Did you manually split these up or have you script?

@NikNakk
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NikNakk commented Oct 12, 2020

Hi @brianmackenna, manually through some sorting and filtering in Excel. I would often do something like this in script, but for this as a one off task it felt more efficient to do it in Excel rather that iteratively writing RegExes which would probably have been my approach otherwise.

@brianmackenna
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brianmackenna commented Oct 13, 2020

That's great. Hopefully no need for scripts soon as we are building tools to build codelists.

Just to confirm is it off this list you filtered?

https://github.com/ebmdatalab/immunosuppressant-covid-codelist-notebook/blob/master/notebooks/immunosuppressants.ipynb

@brianmackenna
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Is this list still required? It has been surpassed I think by high cost drugs codelists?

Perhaps it is just single codelists for primary care dm+d list based on this? https://codelists.opensafely.org/codelist/opensafely/dmards/2020-06-23/

@NikNakk
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NikNakk commented Mar 4, 2021 via email

@brianmackenna
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closing - individual issues have been opend.

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