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update figure paths reports
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LFISHER7 committed Apr 15, 2024
1 parent c5c2c63 commit 6f7b7d8
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Showing 2 changed files with 10 additions and 10 deletions.
12 changes: 6 additions & 6 deletions analysis/report/report.ipynb
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Expand Up @@ -119,12 +119,12 @@
"display(Markdown(\"The below charts show the count of patients prescribed any of the above listed antibiotics each month, followed by a table with the underlying counts and a chart with of the rate of prescribing with the years stacked on top of each other.\"))\n",
"display_image(\"medications_bar_measures_count.jpeg\")\n",
"display_table(\"event_counts_medication.csv\")\n",
"display_image(\"all_medications_by_year.png\")\n",
"display_image(\"all_medications_by_year.jpg\")\n",
"display(Markdown(\"The below charts show the monthly count and rate of patients with any of the listed antibiotics across the study period, with a breakdown by key demographic subgroups.\"))\n",
"display(Markdown(\"##### Count\"))\n",
"display_image(\"medication_any_by_subgroup_count.png\")\n",
"display_image(\"medication_any_by_subgroup_count.jpg\")\n",
"display(Markdown(\"##### Rate\"))\n",
"display_image(\"medication_any_by_subgroup.png\")"
"display_image(\"medication_any_by_subgroup.jpg\")"
]
},
{
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"display(Markdown(\"The below charts show the count of patients with any of the above listed clinical events each month, followed by a table with the underlying counts and a chart with the rate of clinical events with the years stacked on top of each other.\"))\n",
"display_image(\"clinical_bar_measures_count.jpeg\")\n",
"display_table(\"event_counts_clinical.csv\")\n",
"display_image(\"any_clinical_event_by_year.png\")\n",
"display_image(\"any_clinical_event_by_year.jpg\")\n",
"display(Markdown(\"The below charts show the monthly count and rate of patients with any of the listed clinical events across the study period, with a breakdown by key demographic subgroups.\"))\n",
"display(Markdown(\"##### Count\"))\n",
"display_image(\"clinical_any_by_subgroup_count.png\")\n",
"display_image(\"clinical_any_by_subgroup_count.jpg\")\n",
"display(Markdown(\"##### Rate\"))\n",
"display_image(\"clinical_any_by_subgroup.png\")"
"display_image(\"clinical_any_by_subgroup.jpg\")"
]
},
{
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8 changes: 4 additions & 4 deletions analysis/report/report_weekly.ipynb
Original file line number Diff line number Diff line change
Expand Up @@ -124,9 +124,9 @@
"display_table(\"event_counts_medication.csv\", dir=WEEKLY_RESULTS_DIR)\n",
"display(Markdown(\"The below charts show the weekly count and rate of patients with any of the listed antibiotics across the study period, with a breakdown by key demographic subgroups.\"))\n",
"display(Markdown(\"##### Count\"))\n",
"display_image(\"medication_any_by_subgroup_count.png\", dir=WEEKLY_RESULTS_DIR)\n",
"display_image(\"medication_any_by_subgroup_count.jpg\", dir=WEEKLY_RESULTS_DIR)\n",
"display(Markdown(\"##### Rate\"))\n",
"display_image(\"medication_any_by_subgroup.png\", dir=WEEKLY_RESULTS_DIR)"
"display_image(\"medication_any_by_subgroup.jpg\", dir=WEEKLY_RESULTS_DIR)"
]
},
{
Expand Down Expand Up @@ -283,9 +283,9 @@
"display_table(\"event_counts_clinical.csv\", dir=WEEKLY_RESULTS_DIR)\n",
"display(Markdown(\"The below charts show the weekly count and rate of patients with any of the listed clinical events across the study period, with a breakdown by key demographic subgroups.\"))\n",
"display(Markdown(\"##### Count\"))\n",
"display_image(\"clinical_any_by_subgroup_count.png\", dir=WEEKLY_RESULTS_DIR)\n",
"display_image(\"clinical_any_by_subgroup_count.jpg\", dir=WEEKLY_RESULTS_DIR)\n",
"display(Markdown(\"##### Rate\"))\n",
"display_image(\"clinical_any_by_subgroup.png\", dir=WEEKLY_RESULTS_DIR)"
"display_image(\"clinical_any_by_subgroup.jpg\", dir=WEEKLY_RESULTS_DIR)"
]
},
{
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