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MGMT-15243: Skip any zero size manifests when applying (#5355)
When applying manifests when installation is started, we should skip any manifests that are of zero size to prevent them from causing bootstrap problems later. We can't validate zero size at the point of file upload as the UI is presently using an approach where it uploads an empty manifest file to track that the user wishes to add user defined manifests. Discussions are underway to change this but for now we need to take this alternative approach. This PR implements this.
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