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#142 updated the YAML loading in the download module.
download
But the training scripts still use yaml.load instead of yaml.safe_load, e.g.: https://github.com/openvax/mhcflurry/blob/master/mhcflurry/train_allele_specific_models_command.py#L145 https://github.com/openvax/mhcflurry/blob/master/mhcflurry/train_pan_allele_models_command.py#L306
yaml.load
yaml.safe_load
With PyYAML 6.0 (released in 2021) this does not just print a warning, but crashes with an error. Could you adjust these scripts accordingly?
The text was updated successfully, but these errors were encountered:
Thanks for noting this - will take a look
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#142 updated the YAML loading in the
download
module.But the training scripts still use
yaml.load
instead ofyaml.safe_load
, e.g.:https://github.com/openvax/mhcflurry/blob/master/mhcflurry/train_allele_specific_models_command.py#L145
https://github.com/openvax/mhcflurry/blob/master/mhcflurry/train_pan_allele_models_command.py#L306
With PyYAML 6.0 (released in 2021) this does not just print a warning, but crashes with an error.
Could you adjust these scripts accordingly?
The text was updated successfully, but these errors were encountered: