Skip to content

Commit

Permalink
always use self.species after normalization
Browse files Browse the repository at this point in the history
  • Loading branch information
iskandr committed Sep 14, 2016
1 parent e99a0c5 commit 9f42692
Showing 1 changed file with 4 additions and 5 deletions.
9 changes: 4 additions & 5 deletions pyensembl/ensembl_release.py
Original file line number Diff line number Diff line change
Expand Up @@ -74,13 +74,12 @@ def __init__(
server=ENSEMBL_FTP_SERVER):
self.release, self.species, self.server = self.normalize_init_values(
release=release, species=species, server=server)
self.species = species
self.server = server

self.gtf_url = make_gtf_url(
ensembl_release=self.release,
species=species,
server=server)
species=self.species,
server=self.server)

self.transcript_fasta_url = make_fasta_url(
ensembl_release=self.release,
species=self.species.latin_name,
Expand All @@ -90,7 +89,7 @@ def __init__(
ensembl_release=self.release,
species=self.species.latin_name,
sequence_type="pep",
server=server)
server=self.server)

self.reference_name = self.species.which_reference(self.release)

Expand Down

0 comments on commit 9f42692

Please sign in to comment.