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Fixing serialization of VaccinePeptide objects #160

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merged 3 commits into from
Feb 28, 2018
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julia326
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(and a WUSTL link that just broke)

Fixes #159

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coveralls commented Feb 28, 2018

Coverage Status

Coverage increased (+0.02%) to 86.217% when pulling b2f7142 on fix-read-from-json into 75783e5 on master.

return {
"mutant_protein_fragment": self.mutant_protein_fragment,
"mutant_epitope_predictions": self.mutant_epitope_predictions,
"wildtype_epitope_predictions": self.wildtype_epitope_predictions,
"epitope_predictions": epitope_predictions,
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Shouldn't you also serialize/deserialize num_mutant_epitopes_to_keep?

...also, why does that exist?

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it's for one of the outputs, the neoepitope Excel file - I think we maybe used this for Josh Brody's data before?

@julia326 julia326 merged commit 1105c19 into master Feb 28, 2018
@julia326 julia326 deleted the fix-read-from-json branch February 28, 2018 20:12
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3 participants