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runnin sh test.sh in cmd #22

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moanra opened this issue Jun 10, 2019 · 3 comments
Open

runnin sh test.sh in cmd #22

moanra opened this issue Jun 10, 2019 · 3 comments

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@moanra
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moanra commented Jun 10, 2019

Hello
now i am trying to simulate the c302 neurons of the worm.

so i have done :

git clone https://github.com/openworm/c302.git
cd c302
python setup.py install
error2c302

sh test.sh

and i got the error in attachment
can you please give me advice

@pgleeson
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@moanra First of all make sure you have the latest c302 and PyOpenWorm. Then I'd check the location of your installed PyOpenWorm relative to c302. A script run from the c302 directory needs to be able to find the file worm.db which was installed with pow. There is a file https://github.com/openworm/c302/blob/master/pyopenworm.conf which assumes this is in

../PyOpenWorm/.pow/worm.db

Update the location of that and just try running

python c302/OpenWormReader.py

until you get it working.

See also discussion with @mwatts15 about this here: openworm/owmeta#400

@moanra
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moanra commented Jun 16, 2019 via email

@pgleeson
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pgleeson commented Feb 7, 2020

@moanra did you succeed in getting this working? The full sequence of statements for getting c302 installed with the right version of PyOpenWorm (now named owmeta) is here: https://github.com/openworm/c302/blob/master/.travis.yml

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