Name		Name	Last commit message	Last commit date
Latest commit History 65 Commits
.ipynb_checkpoints		.ipynb_checkpoints
__pycache__		__pycache__
anatomical_analysis		anatomical_analysis
general_connectivity_analysis		general_connectivity_analysis
rs		rs
seed_voxel_analysis		seed_voxel_analysis
shen_atlas		shen_atlas
task_based_analysis		task_based_analysis
Analyse_fsl.ipynb		Analyse_fsl.ipynb
Behavior_Connectivity_analysis.ipynb		Behavior_Connectivity_analysis.ipynb
GlobalConn.ipynb		GlobalConn.ipynb
README.md		README.md
SPM_analysis.py		SPM_analysis.py
Seed_based_results.ipynb		Seed_based_results.ipynb
SymptomsCalc_kpe.ipynb		SymptomsCalc_kpe.ipynb
Untitled.ipynb		Untitled.ipynb
aal_labels.csv		aal_labels.csv
all_seed.log		all_seed.log
analyze_ledaLabFiles.py		analyze_ledaLabFiles.py
bioreadPlay.py		bioreadPlay.py
checkGSR.py		checkGSR.py
connUtils.py		connUtils.py
connectivityAnalysis.py		connectivityAnalysis.py
connectivity_forPresentation.py		connectivity_forPresentation.py
createTSeries_cli.py		createTSeries_cli.py
cvxEDA.py		cvxEDA.py
diffMat_2_1.mat		diffMat_2_1.mat
diffMat_2_1_thr.csv		diffMat_2_1_thr.csv
extractSubdata.py		extractSubdata.py
extractingKPE_taskdata.py		extractingKPE_taskdata.py
firstSecondLevel.py		firstSecondLevel.py
firstSecondLevel_slurm.py~		firstSecondLevel_slurm.py~
fmri_fsl_cluster.py		fmri_fsl_cluster.py
gbc_analysis.py		gbc_analysis.py
gsr_connectivity.ipynb		gsr_connectivity.ipynb
hippSeg.py		hippSeg.py
mlKPE_RS.ipynb		mlKPE_RS.ipynb
negEdgAAL.csv		negEdgAAL.csv
neuroKit2.ipynb		neuroKit2.ipynb
posEdgAAL.csv		posEdgAAL.csv
reconAll.py		reconAll.py
restingStateConnectivity_analysis.py		restingStateConnectivity_analysis.py
ridge_cpm.py		ridge_cpm.py
run_firstLevelOnesub.sh		run_firstLevelOnesub.sh
run_firstLevelSlurmSca.sh		run_firstLevelSlurmSca.sh
run_firstLevel_fsl.sh		run_firstLevel_fsl.sh
secondLevel_fsl.py		secondLevel_fsl.py
seedBasedConn_functions.py		seedBasedConn_functions.py
seedTovoxel.py		seedTovoxel.py
ses1_trauma.mat		ses1_trauma.mat
ses2_trauma.mat		ses2_trauma.mat
simpleRename_method.py		simpleRename_method.py
test_cpm.py		test_cpm.py
trauma_ses1.npy		trauma_ses1.npy
trauma_ses1_shen.npy		trauma_ses1_shen.npy
trauma_ses2.npy		trauma_ses2.npy
trauma_ses2_shen.npy		trauma_ses2_shen.npy
trt1_ses1.mat		trt1_ses1.mat
usingFSLRandomise.py		usingFSLRandomise.py

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kpe_task

Kpe Tasks analysis - include connectivity and activity based analysis.

orduek/kpe_task

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