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Update the analysis_centric mapping + transformation logic #103

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rosibaj opened this issue Apr 8, 2020 · 0 comments

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Code Monkeys Spri...

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rosibaj commented Apr 8, 2020 •

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Update the analysis_centric mapping to correctly reflect the Song base schema. Some changes include:

all submitter id fields need to be "submittter_id"
add gender
add new specimen fields
include analysis type
index repository base url

https://github.com/icgc-argo/argo-metadata-schemas/blob/master/mappings/maestro_analysis_centric.json

Expected Outcome

We can see in ES (whether thru Kibana or another method) Maestro indexing from a song a analysis_repository index with the new mapping.

The text was updated successfully, but these errors were encountered:

rosibaj assigned Buwujiu

rosibaj modified the milestones: [FUTURE] Donkey Kong - Sprint 26 - Data Submission Release 4, [FUTURE] Code Monkeys Sprint 28

rosibaj modified the milestones: Code Monkeys Sprint 28, [FUTUREST] Code Monkeys Sprint 29

rosibaj closed this as completed

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