Popular repositories

1. CompassCompact CompassCompact Public

   A compact version of Oxford Compass (Complete Pathogen Analysis Software Solution)

   Python 7 3

2. gnomonicus gnomonicus Public

   Python code to integrate results of tb-pipeline and provide an antibiogram, mutations and variants

   Python 5

3. gumpy gumpy Public

   Genetics with numpy

   Python 4 1

4. ncov2019-artic-nf ncov2019-artic-nf Public

   Forked from connor-lab/ncov2019-artic-nf

   A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019

   Nextflow 3 2

5. tuberculosis_amr_catalogues tuberculosis_amr_catalogues Public

   Python 2

6. piezo piezo Public

   Python 2