Storage trait API changes

[sandreae]

Implement changes from p2panda/p2panda#469, refactoring (especially in DocumentStore) and a chance for better docs!

• make changes required by Storage trait API changes p2panda#469
  • update store APIs
  • remove deprecated StorageEntry and EntryWithOperation
  • meaningful changes to the methods on DocumentStore which now returns Documents from all getter methods
• big refactor of document and document view insertion methods (these methods are not defined on DocumentStore trait anymore)
• add document_id column to document_views table
• update tests
• update effected modules
• update and a chance to improve docs for these stores
  • entry
  • log
  • operation
  • document

📋 Checklist

• Add tests that cover your changes
• Add this PR to the Unreleased section in CHANGELOG.md
• Link this PR to any issues it closes
• New files contain a SPDX license header

[codecov]

Codecov Report

Base: 94.61% // Head: 94.17% // Decreases project coverage by -0.45% ⚠️

Coverage data is based on head (f242db9) compared to base (926e939).
Patch coverage: 89.10% of modified lines in pull request are covered.

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #268      +/-   ##
==========================================
- Coverage   94.61%   94.17%   -0.45%     
==========================================
  Files          59       61       +2     
  Lines        5108     5147      +39     
==========================================
+ Hits         4833     4847      +14     
- Misses        275      300      +25     

Impacted Files	Coverage Δ
aquadoggo/src/context.rs	100.00% <ø> (ø)
aquadoggo/src/graphql/client/utils.rs	93.75% <ø> (ø)
aquadoggo/src/graphql/replication/client.rs	85.71% <ø> (ø)
aquadoggo/src/db/stores/task.rs	91.52% <42.85%> (ø)
aquadoggo/src/db/types/document.rs	47.05% <47.05%> (ø)
aquadoggo/src/db/stores/operation.rs	85.33% <72.00%> (-8.05%)	⬇️
aquadoggo/src/db/stores/test_utils/helpers.rs	98.71% <80.00%> (-1.29%)	⬇️
aquadoggo/src/db/types/operation.rs	86.66% <86.66%> (ø)
aquadoggo/src/graphql/client/dynamic_query.rs	95.50% <86.95%> (+1.94%)	⬆️
aquadoggo/src/db/stores/document.rs	91.78% <89.78%> (-1.46%)	⬇️
... and 24 more

Help us with your feedback. Take ten seconds to tell us how you rate us. Have a feature suggestion? Share it here.

☔ View full report at Codecov.
📢 Do you have feedback about the report comment? Let us know in this issue.

[adzialocha]

Cool! After reading the API changes this was really easy to follow. I'm happy we're removing some fluff. Thank you!!

I haven't looked very closely at the tests but I trust that they are all still doing their job 😆

As always, only some formatting things and minor requests. With CHANGELOG.md entry this is ready to go.