address #113 - patch bug where TPM bootstrap summary target_ids are moved

[warrenmcg]

Hi @pimentel,

To address #113, I realized that the error occurs because the TPM bootstrap summary object in bs_quants has no rownames, so no target_ids will be found. I further discovered that target_ids are removed from the tpm bootstrap summary object after the counts_to_tpm step in process_bootstrap. I've made a patch that makes sure that the target_ids remain. This should fix the issue.

[pimentel]

thank you!

[Cyrus714]

Hi, I had the same problem with some transcripts, not all of them, but I still didn't figure out how to fix that. For some transcripts, I get charts for est_counts, but for some others, that I know they should be in my analysis, I get the message "Error: couldn't find target_id".