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Feature request: ability to ignore read groups #3

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holtjma opened this issue May 5, 2023 · 1 comment · Fixed by #8
Closed

Feature request: ability to ignore read groups #3

holtjma opened this issue May 5, 2023 · 1 comment · Fixed by #8
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enhancement New feature or request

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@holtjma
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holtjma commented May 5, 2023

Request for a flag that will enable a user to provide BAM files without a read group ID. Reads would have to be assumed to come from a single sample, so attempts at multi-sample would throw errors still.

Requested by @mrvollger via https://twitter.com/mrvollger/status/1654323827453865984

@holtjma holtjma added the enhancement New feature or request label May 5, 2023
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holtjma commented May 11, 2023

This should resolve the issue, let me know if you have any questions about it!

https://github.com/PacificBiosciences/HiPhase/blob/main/docs/user_guide.md#how-do-i-fix-error-during-bam-read-group-parsing-bam-file-has-no-read-groups-rg-tag

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