This is the repository for the MG-RAST metagenome analysis system. Take a look at MG-RAST.
Don't try this at home.
MG-RAST is made available under a BSD type LICENSE, see the LICENSE file for details.
server at http://www.mg-rast.org, we are not resourced to help with local installations. So as much as we'd like to we can't help with local installations of this software.
Hardware
MG-RAST is a pipeline, an archive, a complex web interface and several other tools. The entire systems was designed for a Linux/Unix system. We run it on a dedicated small cluster for the server infrastructure and heavily utilize CLOUD computing resources.
Systems-Software
- MySQL
- Cassandra
- Perl
- Python
- R
- Apache
- NGINX
For the bioinformatics software and databases used in MG-RAST please see our manual: ftp://ftp.metagenomics.anl.gov/manual.pdf
type make
export TAG=`date +"%Y%m%d.%H%M"`
git clone -b api https://github.com/MG-RAST/MG-RAST.git
cd MG-RAST
docker build --force-rm --no-cache --rm -t mgrast/api:${TAG} .
skycore push mgrast/api:${TAG}