Association between MYC gene amplification and mutations in BRCA1 and BRCA2 genes in HGSOC

Scripts

This repository includes scripts to:

1. Process raw data into tidy data.
2. Statistical analysis scripts
3. R markdown script for results

Data

The data required to run the analysis pipeline is not available via this repository and must be acquired directly from the primary sources. The data files required and their placement inside the proyect are as follows:

./data/2010-09-11380C-Table_S1.2.xlsx
./data/TCGA-and-HPA_DATA-MYC-BRCA1-BRCA2.xlsx
./data/HGSC_DB.xlsx

Note: The "data" directory is excluded via gitignore.