Jax-ws and commons logging problem on Payara (Payara Server 4.1.1.154)

[figolino]

Hi I was trying our Glassfish based applicaiton with payara but i get this error on startup

On Glassfish 4.1 its working fine?! So i guess its an OSGI class loading problem.....

[2015-11-30T12:14:37.269+0000] [Payara 4.1] [SEVERE] [] [javax.enterprise.web] [tid: _ThreadID=54 _ThreadName=admin-listener(5)] [timeMillis: 1448885677269] [levelValue: 1000] [[
WebModule[/public]Exception starting filter LoginFilter
java.lang.NoClassDefFoundError: org/apache/commons/logging/LogFactory
at org.apache.xml.security.Init.(Init.java:59)
at org.opensaml.DefaultBootstrap.initializeXMLSecurity(DefaultBootstrap.java:195)
at org.opensaml.DefaultBootstrap.bootstrap(DefaultBootstrap.java:98)
at dk.itst.oiosaml.sp.service.SPFilter.(SPFilter.java:108)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:422)
at org.jboss.weld.injection.ConstructorInjectionPoint.newInstance(ConstructorInjectionPoint.java:119)
at org.jboss.weld.injection.ConstructorInjectionPoint.invokeAroundConstructCallbacks(ConstructorInjectionPoint.java:92)
at org.jboss.weld.injection.ConstructorInjectionPoint.newInstance(ConstructorInjectionPoint.java:78)
at org.jboss.weld.injection.producer.AbstractInstantiator.newInstance(AbstractInstantiator.java:28)
at org.jboss.weld.injection.producer.BasicInjectionTarget.produce(BasicInjectionTarget.java:116)
at org.jboss.weld.injection.producer.BeanInjectionTarget.produce(BeanInjectionTarget.java:179)
at org.glassfish.weld.services.JCDIServiceImpl.createManagedObject(JCDIServiceImpl.java:334)
at org.glassfish.weld.services.JCDIServiceImpl.createManagedObject(JCDIServiceImpl.java:263)
at com.sun.enterprise.container.common.impl.managedbean.ManagedBeanManagerImpl.createManagedBean(ManagedBeanManagerImpl.java:486)
at com.sun.enterprise.container.common.impl.managedbean.ManagedBeanManagerImpl.createManagedBean(ManagedBeanManagerImpl.java:439)
at com.sun.enterprise.container.common.impl.util.InjectionManagerImpl.createManagedObject(InjectionManagerImpl.java:336)
at com.sun.enterprise.web.WebContainer.createFilterInstance(WebContainer.java:1007)
at com.sun.enterprise.web.WebModule.createFilterInstance(WebModule.java:2143)
at org.apache.catalina.core.ApplicationFilterConfig.getFilter(ApplicationFilterConfig.java:264)
at org.apache.catalina.core.ApplicationFilterConfig.(ApplicationFilterConfig.java:131)
at org.apache.catalina.core.StandardContext.filterStart(StandardContext.java:5331)
at org.apache.catalina.core.StandardContext.start(StandardContext.java:5974)
at com.sun.enterprise.web.WebModule.start(WebModule.java:691)
at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:1041)
at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:1024)
at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:747)
at com.sun.enterprise.web.WebContainer.loadWebModule(WebContainer.java:2286)
at com.sun.enterprise.web.WebContainer.loadWebModule(WebContainer.java:1932)
at com.sun.enterprise.web.WebApplication.start(WebApplication.java:139)
at org.glassfish.internal.data.EngineRef.start(EngineRef.java:122)
at org.glassfish.internal.data.ModuleInfo.start(ModuleInfo.java:291)
at org.glassfish.internal.data.ApplicationInfo.start(ApplicationInfo.java:353)
at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:500)
at com.sun.enterprise.v3.server.ApplicationLifecycle.deploy(ApplicationLifecycle.java:219)
at org.glassfish.deployment.admin.DeployCommand.execute(DeployCommand.java:487)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$2$1.run(CommandRunnerImpl.java:539)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$2$1.run(CommandRunnerImpl.java:535)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:360)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$2.execute(CommandRunnerImpl.java:534)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$3.run(CommandRunnerImpl.java:565)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$3.run(CommandRunnerImpl.java:557)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:360)
at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:556)
at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:1464)
at com.sun.enterprise.v3.admin.CommandRunnerImpl.access$1300(CommandRunnerImpl.java:109)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1846)
at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1722)
at com.sun.enterprise.v3.admin.AdminAdapter.doCommand(AdminAdapter.java:534)
at com.sun.enterprise.v3.admin.AdminAdapter.onMissingResource(AdminAdapter.java:224)
at org.glassfish.grizzly.http.server.StaticHttpHandlerBase.service(StaticHttpHandlerBase.java:189)
at com.sun.enterprise.v3.services.impl.ContainerMapper$HttpHandlerCallable.call(ContainerMapper.java:459)
at com.sun.enterprise.v3.services.impl.ContainerMapper.service(ContainerMapper.java:167)
at org.glassfish.grizzly.http.server.HttpHandler.runService(HttpHandler.java:206)
at org.glassfish.grizzly.http.server.HttpHandler.doHandle(HttpHandler.java:180)
at org.glassfish.grizzly.http.server.HttpServerFilter.handleRead(HttpServerFilter.java:235)
at org.glassfish.grizzly.filterchain.ExecutorResolver$9.execute(ExecutorResolver.java:119)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeFilter(DefaultFilterChain.java:283)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.executeChainPart(DefaultFilterChain.java:200)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.execute(DefaultFilterChain.java:132)
at org.glassfish.grizzly.filterchain.DefaultFilterChain.process(DefaultFilterChain.java:111)
at org.glassfish.grizzly.ProcessorExecutor.execute(ProcessorExecutor.java:77)
at org.glassfish.grizzly.nio.transport.TCPNIOTransport.fireIOEvent(TCPNIOTransport.java:536)
at org.glassfish.grizzly.strategies.AbstractIOStrategy.fireIOEvent(AbstractIOStrategy.java:112)
at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.run0(WorkerThreadIOStrategy.java:117)
at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy.access$100(WorkerThreadIOStrategy.java:56)
at org.glassfish.grizzly.strategies.WorkerThreadIOStrategy$WorkerThreadRunnable.run(WorkerThreadIOStrategy.java:137)
at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.doWork(AbstractThreadPool.java:591)
at org.glassfish.grizzly.threadpool.AbstractThreadPool$Worker.run(AbstractThreadPool.java:571)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.ClassNotFoundException: org.apache.commons.logging.LogFactory not found by org.glassfish.metro.webservices-osgi [289]
at org.apache.felix.framework.BundleWiringImpl.findClassOrResourceByDelegation(BundleWiringImpl.java:1532)
at org.apache.felix.framework.BundleWiringImpl.access$400(BundleWiringImpl.java:75)
at org.apache.felix.framework.BundleWiringImpl$BundleClassLoader.loadClass(BundleWiringImpl.java:1955)
at java.lang.ClassLoader.loadClass(ClassLoader.java:357)
... 74 more
]]

[figolino]

Ok if you put the commons-logging-1.2.jar in the /payara41/glassfish/modules folder its woking but this is a ugly hack! so i guess the problem is the xmlsec.jar in the jax-ws version witch is used?!!!

[smillidge]

This is a duplicate of #493 and there is a pull request pending to fix this.

[smillidge]

Relevant pull request is #523

[smillidge]

Closing as duplicate