Scripts are organized in the following folders: Image processing, analysis. All atlases and templates referenced are disseminated on the NITRC Downloads page for Auto_EACSF: https://www.nitrc.org/projects/auto_eacsf/. README files can be found in each folder, so please see these for additional details.
Data was collected as a part of the Healthy Brain Network Project conducted by the Child Mind Institute (see http://fcon_1000.projects.nitrc.org/indi/cmi_healthy_brain_network/sharing_neuro.html).
Coding is not our primary expertise--but if you have questions concerning script usage, please contact us through our lab webpage: https://brain.byu.edu/contact. Any questions regarding Auto_EACSF should be sent to the NITRC forum page. Best of luck!