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GitHub flow #349
GitHub flow #349
Commits on Jun 12, 2023
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docs: #283 update description and news
Zelos Zhu committedJun 12, 2023 Configuration menu - View commit details
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Merge pull request #284 from pharmaverse/283_news_description_postrel…
…ease_tidying@devel Closes #283 update description and news as post-release cleanup tasks
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Commits on Jun 27, 2023
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Closes #271, #213, #260, #240 Documentation Update of get_datasets();…
… keep_source_vars argument; @family tag; compute_ functions (#287) * docs: #271 #213 clarify get_datasets and add keep_source_vars to prog strat * docs: #260 cleanup @family mentions * docs: #240 add blurb about compute functions * docs: #271 #213 #240 #260 add news blurb * adopt suggestion for family/keywords Co-authored-by: Ben Straub <ben.x.straub@gsk.com> * docs #271 adopt get_dataset feedback * docs: #213 #240 adopt recommendations from PR * chore: #240 add BMI to WORDLIST for spellcheck * chore: #271 #213 #260 adopt feedback --------- Co-authored-by: Zelos Zhu <zdz2101@github.com> Co-authored-by: Ben Straub <ben.x.straub@gsk.com>
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Commits on Jun 29, 2023
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Closes #264, #288 cleanup assertions and continue deprecation process (…
…#289) * feat: #288 cleanup deprecation process * feat: #264 deprecate assert_function * test: #264 cleanup some tests in assert_function, confused how others would go * test: #264 rewrite tests in a more logical way * chore: #264 run styler/lintr * chore: #288 revert back to devel test file * chore: #288 properly fix assert_order_vars again * feat: #264 begin deprecation of redundant assertions * feat: #288 deprecate assert_named_exprs * deprecate assert_has_variables properly #264 * chore: #264 run styler * docs: #264 add blurb in news for the deprecated assertions * chore: #264 fix description version and remove deprecated examples --------- Co-authored-by: Zelos Zhu <zdz2101@github.com>
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Commits on Jun 30, 2023
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Propagate renv.lock from pharmaverse/admiralci (#294)
renv update from pharmaverse/admiralci Co-authored-by: dgrassellyb <dgrassellyb@users.noreply.github.com>
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Commits on Aug 1, 2023
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Closes #22 #181 #201 #292 #298 Variety of small-scale general documen…
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Commits on Aug 2, 2023
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Closes #302 Adding Snapshot testing guidance to unit testing vignette (…
…#308) * Update unit_test_guidance.Rmd * Update NEWS.md * Update NEWS.md
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Commits on Aug 4, 2023
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Propagate renv.lock from pharmaverse/admiralci (#310)
* renv / codespaces update from pharmaverse/admiralci --------- Co-authored-by: galachad <galachad@users.noreply.github.com> Co-authored-by: Adam Foryś <adam.forys@gmail.com>
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Commits on Aug 6, 2023
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Closes #295 template documentation@devel (#300)
* #295 set up package extension guidance page * #295 fix vignetteindexentry * #295 chore: spellcheck * #295 chore: fix encoding issues in vignettes that prevented package from being built * #295: updates following review * #295 Chore: spellcheck * Update vignettes/package_extensions.Rmd Co-authored-by: Ross Farrugia <82581364+rossfarrugia@users.noreply.github.com> * #295 update to refer to admiraldev devel site * #295 Chore: spellcheck --------- Co-authored-by: Ross Farrugia <82581364+rossfarrugia@users.noreply.github.com>
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Commits on Aug 9, 2023
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Closes #296 document_missing_value_s@devel (#311)
* #296 - `missing_value` and `missing_values` added to the table of common arguments. * #296 - add in discussion of when to use singular vs plural arguments to programming strategy. * #296 - run checks required for PR and update NEWS.md. * #296 - Update according to requested changes. * #296 - revert the 'wrapped' changes in the programming strategy vignette * #296 - re-insert the new text into the programming strategy vignette, altered according to changes requested. * #296 - update NEWS.md with changes requested and run the required checks for PR.
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Closes #282: Test Data Guidance vignette (#293)
* #282: add test_data_guidance.Rmd, copy from admiraldata README devel * #282: update .yml * #282: add link for packages, remove SDTM, add naming conventions for program name * #282 spelling * #282: link to two data packages * #282: updated wordlist * #282: update pharmaverseadam description --------- Co-authored-by: Edoardo Mancini <53403957+manciniedoardo@users.noreply.github.com>
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Commits on Aug 10, 2023
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Propagate renv.lock from pharmaverse/admiralci (#314)
renv / codespaces update from pharmaverse/admiralci Co-authored-by: galachad <galachad@users.noreply.github.com>
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Commits on Aug 27, 2023
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Propagate renv.lock from pharmaverse/admiralci (#315)
* renv / codespaces update from pharmaverse/admiralci * renv / codespaces update from pharmaverse/admiralci --------- Co-authored-by: galachad <galachad@users.noreply.github.com>
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Commits on Aug 30, 2023
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Closes #306 argument descriptions added to table (#320)
argument descriptions added to table Co-authored-by: Zelos Zhu <zelos.zhu@atorusresearch.com>
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Closes #316 remove messaging that includes "-" as year not handled (#317
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Commits on Sep 1, 2023
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Closes #318 #321 Documentation updates around admiral.test, staged de…
…pendencies, and function arguments (#323)
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Commits on Sep 5, 2023
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Commits on Sep 7, 2023
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Closes #312 breakup wall of text (#319)
* brick in the wall * remove special characters from image name * remove special characters from image name * replaced iframe with png * fixed image reference --------- Co-authored-by: Zelos Zhu <zelos.zhu@atorusresearch.com>
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Closes #328 add missing news entries (#329)
* feat: #295 add missing news entries * feat: #295 add missing news entries * fixed it * feat: add news entry for #306 * chore: #312 missing reference * chore: fix link that pointed to merged branch and use devel * Update NEWS.md --------- Co-authored-by: Zelos Zhu <zdz2101@github.com> Co-authored-by: Ben Straub <ben.x.straub@gsk.com>
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Commits on Sep 14, 2023
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Commits on Sep 15, 2023
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Commits on Nov 15, 2023
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Commits on Nov 16, 2023
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Commits on Nov 17, 2023
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Merge branch 'github-flow' of https://github.com/pharmaverse/admiraldev…
… into github-flow
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