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Added missing config.h, updated Makefiles, and added html docs.
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@victorliu
victorliu committed Jan 5, 2014
1 parent c0a8e69 commit 2edb6b2
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Showing 57 changed files with 22,335 additions and 8 deletions.
8 changes: 4 additions & 4 deletions Makefile
View file
Expand Up @@ -137,7 +137,7 @@ S4r_LIBOBJS = \
$(OBJDIR)/S4r/periodic_off2.o

ifndef LAPACK_LIB
S4_LIBOBJS += $(OBJDIR)/Eigensystems.o
S4_LIBOBJS += $(OBJDIR)/S4k/Eigensystems.o
endif

$(S4_LIBNAME): objdir $(S4_LIBOBJS)
Expand Down Expand Up @@ -228,7 +228,7 @@ $(OBJDIR)/S4r/predicates.o: S4r/predicates.c

#### Lua Frontend

$(OBJDIR)/S4k/main_lua.o: S4/main_lua.c
$(OBJDIR)/S4k/main_lua.o: S4/main_lua.c objdir
$(CC) -c $(CFLAGS) $(CPPFLAGS) $(LUA_INC) $< -o $@
S4lua: $(OBJDIR)/S4k/main_lua.o $(S4_LIBNAME)
$(CXX) $(CFLAGS) $(CPPFLAGS) $< -o $(S4_BINNAME) $(S4_LIBNAME) $(LIBS) $(LUA_LIB)
Expand All @@ -239,12 +239,12 @@ $(OBJDIR)/S4r/lua_named_arg.o: S4r/lua_named_arg.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $(LUA_INC) $< -o $@
$(OBJDIR)/S4r/S4r.o: S4r/S4r.cpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) $(LUA_INC) $< -o $@
S4rlua: $(OBJDIR)/S4r/main_lua.o $(OBJDIR)/S4r/lua_named_arg.o $(OBJDIR)/S4r/S4r.o $(S4r_LIBNAME)
S4rlua: objdir $(OBJDIR)/S4r/main_lua.o $(OBJDIR)/S4r/lua_named_arg.o $(OBJDIR)/S4r/S4r.o $(S4r_LIBNAME)
$(CXX) $(CFLAGS) $(CPPFLAGS) $(OBJDIR)/S4r/main_lua.o $(OBJDIR)/S4r/lua_named_arg.o $(OBJDIR)/S4r/S4r.o -o $@ $(S4r_LIBNAME) $(LIBS) $(LUA_LIB)

#### Python extension

S4_pyext:
S4_pyext: objdir $(S4_LIBNAME)
echo "$(LIBS)" > $(OBJDIR)/tmp.txt
sh gensetup.py.sh $(OBJDIR) $(S4_LIBNAME)
python setup.py build
Expand Down
253 changes: 253 additions & 0 deletions Makefile.mingw32
View file
@@ -0,0 +1,253 @@
# To build:
# make <target>
# Use the 'lib' target first to build the library, then either the Lua
# or Python targets are 'S4lua' and 'python_ext', respectively.

# Set these to the flags needed to link against BLAS and Lapack.
# If left blank, then performance may be very poor.
# On Mac OS,
# BLAS_LIB = -framework vecLib
# LAPACK_LIB = -framework vecLib
# On Debian, with reference BLAS and Lapack (slow)
# BLAS_LIB = -lblas
# LAPACK_LIB = -llapack
BLAS_LIB =
LAPACK_LIB =

# Specify the flags for Lua headers and libraries (only needed for Lua frontend)
# On Debian,
# LUA_INC = -I/usr/include/lua5.2
# LUA_LIB = -llua5.2 -ldl -lm
LUA_INC = -I/c/code/libs/lua-5.2.3/install/include
LUA_LIB = -L/c/code/libs/lua-5.2.3/install/lib -llua -lm

# Typically if installed,
# FFTW3_INC can be left empty
# FFTW3_LIB = -lfftw3
FFTW3_INC =
FFTW3_LIB =

# Typically,
# PTHREAD_INC = -DHAVE_UNISTD_H -lpthread
# PTHREAD_LIB = -lpthread
PTHREAD_INC =
PTHREAD_LIB =

# Typically if installed,
# CHOLMOD_INC = -I/usr/include/suitesparse
# CHOLMOD_LIB = -lcholmod -lamd -lcolamd -lcamd -lccolamd
CHOLMOD_INC =
CHOLMOD_LIB =

# Specify the MPI library
MPI_INC =
MPI_LIB =

# Specify custom compilers if needed
CXX = g++
CC = gcc

CFLAGS = -O3 -msse -msse2 -msse3 -static

OBJDIR = ./build
S4_BINNAME = $(OBJDIR)/S4
S4_LIBNAME = $(OBJDIR)/libS4.a
S4r_LIBNAME = $(OBJDIR)/libS4r.a

##################### DO NOT EDIT BELOW THIS LINE #####################

#### Set the compilation flags

CPPFLAGS = -I. -IS4 -IS4/RNP -IS4/kiss_fft

ifdef BLAS_LIB
CPPFLAGS += -DHAVE_BLAS
endif

ifdef LAPACK_LIB
CPPFLAGS += -DHAVE_LAPACK
endif

ifdef FFTW3_LIB
CPPFLAGS += -DHAVE_FFTW3 $(FFTW3_INC)
endif

ifdef PTHREAD_LIB
CPPFLAGS += -DHAVE_LIBPTHREAD $(PTHREAD_INC)
endif

ifdef CHOLMOD_LIB
CPPFLAGS += -DHAVE_LIBCHOLMOD $(CHOLMOD_INC)
endif

ifdef MPI_LIB
CPPFLAGS += -DHAVE_MPI $(MPI_INC)
endif

LIBS = $(BLAS_LIB) $(LAPACK_LIB) $(FFTW3_LIB) $(PTHREAD_LIB) $(CHOLMOD_LIB)

#### Compilation targets

all: $(S4_LIBNAME)

objdir:
mkdir -p $(OBJDIR)
mkdir -p $(OBJDIR)/S4k
mkdir -p $(OBJDIR)/S4r

S4_LIBOBJS = \
$(OBJDIR)/S4k/S4.o \
$(OBJDIR)/S4k/rcwa.o \
$(OBJDIR)/S4k/fmm_common.o \
$(OBJDIR)/S4k/fmm_FFT.o \
$(OBJDIR)/S4k/fmm_kottke.o \
$(OBJDIR)/S4k/fmm_closed.o \
$(OBJDIR)/S4k/fmm_PolBasisNV.o \
$(OBJDIR)/S4k/fmm_PolBasisVL.o \
$(OBJDIR)/S4k/fmm_PolBasisJones.o \
$(OBJDIR)/S4k/fmm_experimental.o \
$(OBJDIR)/S4k/fft_iface.o \
$(OBJDIR)/S4k/pattern.o \
$(OBJDIR)/S4k/intersection.o \
$(OBJDIR)/S4k/predicates.o \
$(OBJDIR)/S4k/numalloc.o \
$(OBJDIR)/S4k/gsel.o \
$(OBJDIR)/S4k/sort.o \
$(OBJDIR)/S4k/kiss_fft.o \
$(OBJDIR)/S4k/kiss_fftnd.o \
$(OBJDIR)/S4k/SpectrumSampler.o \
$(OBJDIR)/S4k/cubature.o \
$(OBJDIR)/S4k/Interpolator.o \
$(OBJDIR)/S4k/convert.o

S4r_LIBOBJS = \
$(OBJDIR)/S4r/Material.o \
$(OBJDIR)/S4r/LatticeGridRect.o \
$(OBJDIR)/S4r/LatticeGridArb.o \
$(OBJDIR)/S4r/POFF2Mesh.o \
$(OBJDIR)/S4r/PeriodicMesh.o \
$(OBJDIR)/S4r/Shape.o \
$(OBJDIR)/S4r/Simulation.o \
$(OBJDIR)/S4r/Layer.o \
$(OBJDIR)/S4r/Pseudoinverse.o \
$(OBJDIR)/S4r/Eigensystems.o \
$(OBJDIR)/S4r/IRA.o \
$(OBJDIR)/S4r/intersection.o \
$(OBJDIR)/S4r/predicates.o \
$(OBJDIR)/S4r/periodic_off2.o

ifndef LAPACK_LIB
S4_LIBOBJS += $(OBJDIR)/S4k/Eigensystems.o
endif

$(S4_LIBNAME): objdir $(S4_LIBOBJS)
$(AR) crvs $@ $(S4_LIBOBJS)
$(S4r_LIBNAME): objdir $(S4r_LIBOBJS)
$(AR) crvs $@ $(S4r_LIBOBJS)

$(OBJDIR)/S4k/S4.o: S4/S4.cpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/rcwa.o: S4/rcwa.cpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/fmm_common.o: S4/fmm/fmm_common.cpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/fmm_FFT.o: S4/fmm/fmm_FFT.cpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/fmm_kottke.o: S4/fmm/fmm_kottke.cpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/fmm_closed.o: S4/fmm/fmm_closed.cpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/fmm_PolBasisNV.o: S4/fmm/fmm_PolBasisNV.cpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/fmm_PolBasisVL.o: S4/fmm/fmm_PolBasisVL.cpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/fmm_PolBasisJones.o: S4/fmm/fmm_PolBasisJones.cpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/fmm_experimental.o: S4/fmm/fmm_experimental.cpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/fft_iface.o: S4/fmm/fft_iface.cpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/pattern.o: S4/pattern/pattern.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/intersection.o: S4/pattern/intersection.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/predicates.o: S4/pattern/predicates.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/numalloc.o: S4/numalloc.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/gsel.o: S4/gsel.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/sort.o: S4/sort.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/kiss_fft.o: S4/kiss_fft/kiss_fft.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/kiss_fftnd.o: S4/kiss_fft/tools/kiss_fftnd.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/SpectrumSampler.o: S4/SpectrumSampler.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/cubature.o: S4/cubature.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/Interpolator.o: S4/Interpolator.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/convert.o: S4/convert.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4k/Eigensystems.o: S4/RNP/Eigensystems.cpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) $< -o $@




$(OBJDIR)/S4r/Material.o: S4r/Material.cpp S4r/Material.hpp S4r/Types.hpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) -I. $< -o $@
$(OBJDIR)/S4r/LatticeGridRect.o: S4r/LatticeGridRect.cpp S4r/PeriodicMesh.hpp S4r/Types.hpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) -I. $< -o $@
$(OBJDIR)/S4r/LatticeGridArb.o: S4r/LatticeGridArb.cpp S4r/PeriodicMesh.hpp S4r/Types.hpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) -I. $< -o $@
$(OBJDIR)/S4r/POFF2Mesh.o: S4r/POFF2Mesh.cpp S4r/PeriodicMesh.hpp S4r/Types.hpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) -I. $< -o $@
$(OBJDIR)/S4r/PeriodicMesh.o: S4r/PeriodicMesh.cpp S4r/PeriodicMesh.hpp S4r/Types.hpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) -I. $< -o $@
$(OBJDIR)/S4r/Shape.o: S4r/Shape.cpp S4r/Shape.hpp S4r/Types.hpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) -I. $< -o $@
$(OBJDIR)/S4r/Simulation.o: S4r/Simulation.cpp S4r/Simulation.hpp S4r/StarProduct.hpp S4r/Types.hpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) -I. $< -o $@
$(OBJDIR)/S4r/Layer.o: S4r/Layer.cpp S4r/Layer.hpp S4r/Types.hpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) -I. $< -o $@
$(OBJDIR)/S4r/Pseudoinverse.o: S4r/Pseudoinverse.cpp S4r/Pseudoinverse.hpp S4r/Types.hpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) -I. $< -o $@
$(OBJDIR)/S4r/Eigensystems.o: S4r/Eigensystems.cpp S4r/Eigensystems.hpp S4r/Types.hpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) -I. $< -o $@
$(OBJDIR)/S4r/IRA.o: S4r/IRA.cpp S4r/IRA.hpp S4r/Types.hpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) -I. $< -o $@
$(OBJDIR)/S4r/intersection.o: S4r/intersection.c S4r/intersection.h
$(CC) -c -O3 $< -o $@
$(OBJDIR)/S4r/periodic_off2.o: S4r/periodic_off2.c S4r/periodic_off2.h
$(CC) -c $(CFLAGS) $(CPPFLAGS) $< -o $@
$(OBJDIR)/S4r/predicates.o: S4r/predicates.c
$(CC) -c -O3 $< -o $@

#### Lua Frontend

$(OBJDIR)/S4k/main_lua.o: S4/main_lua.c objdir
$(CC) -c $(CFLAGS) $(CPPFLAGS) $(LUA_INC) $< -o $@
S4lua: $(OBJDIR)/S4k/main_lua.o $(S4_LIBNAME)
$(CXX) $(CFLAGS) $(CPPFLAGS) $< -o $(S4_BINNAME) $(S4_LIBNAME) $(LIBS) $(LUA_LIB)

$(OBJDIR)/S4r/main_lua.o: S4r/main_lua.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $(LUA_INC) $< -o $@
$(OBJDIR)/S4r/lua_named_arg.o: S4r/lua_named_arg.c
$(CC) -c $(CFLAGS) $(CPPFLAGS) $(LUA_INC) $< -o $@
$(OBJDIR)/S4r/S4r.o: S4r/S4r.cpp
$(CXX) -c $(CFLAGS) $(CPPFLAGS) $(LUA_INC) $< -o $@
S4rlua: objdir $(OBJDIR)/S4r/main_lua.o $(OBJDIR)/S4r/lua_named_arg.o $(OBJDIR)/S4r/S4r.o $(S4r_LIBNAME)
$(CXX) $(CFLAGS) $(CPPFLAGS) $(OBJDIR)/S4r/main_lua.o $(OBJDIR)/S4r/lua_named_arg.o $(OBJDIR)/S4r/S4r.o -o $@ $(S4r_LIBNAME) $(LIBS) $(LUA_LIB)

#### Python extension

S4_pyext: objdir $(S4_LIBNAME)
echo "$(LIBS)" > $(OBJDIR)/tmp.txt
sh gensetup.py.sh $(OBJDIR) $(S4_LIBNAME)
python setup.py build

clean:
rm -rf $(OBJDIR)

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