Illegal memory access inside of SimulationMap constructor

[kolayne]

(This may be a duplicate of #29 or a symptom of #32. This is likely to be a duplicate of #31)

For smaller cubes, which seems to be not affected by #32 (at least, I'm not receiving SIGABRTs for them), another error occurs.

The app compiled for GPU fails to finish constructing a SimulationMap object because of an illegal memory access (attaching a patch I'm using to determine this)
gpu.patch.txt (GitHub doesn't allow uploading .patch files for some reason...)

The app compiled for CPU does finish SimulationMap initialization (at least for me) but fails on the second iteration of the loop:

minds_crawl/src/main_logic/main.cpp

Lines 55 to 68 in 66da82c

	while(true)
	{
	for(RunIterationFunc f : iteration_runners)
	{
	f(simulation_map, &iteration_number);
	}
	if(!send_particles_to_visualization(visualization_endpoint, simulation_map->nodes,
	simulation_map->get_n_of_nodes()))
	{
	std::cerr << "Error sending http request to visualization. Stopping the simulation process\n";
	break;
	}
	}

Though I'm not 100% sure it's the same issue as the problem described above...

[kolayne]

No, this doesn't seem to be a symptom of #32, because I can reproduce the same issue in #40, which should fix #32