This package provides a reference implementation of our algorithm for drug homogeneity assessment in ion images extracted from MSI datasets.
- Depends on
spatstat
- Install devtools: in the R/R Studio shell type
install.packages("devtools")
- Install HomogenMSI: In the shell type
library(devtools)
install_github("pietrofranceschi/HomogenMSI", dependencies = TRUE)
To additionally build the vignette the previous command should include build_vignettes = TRUE
library(devtools)
install_github("pietrofranceschi/HomogenMSI", dependencies = TRUE, build_vignettes = TRUE)
- Load the package: In shell type
library(HomogenMSI)
For the deails see the package vignette
email: Mridula Prasad (mridula.prasad@fmach.it)