Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)
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sort-tools
LICENSE
README.md
RUNME_bpspikesorting.m
script0_simulateDataForTesting.m
setSpikeSortParams.m
step1_estimWaveforms.m
step2_WhitenData.m
step3_reestimWaveforms.m
step4_BPspikesort.m
step5_analyzePerformance_simData.m

README.md

BinaryPursuitSpikeSorting

Detect synchronous and overlapped spikes in extracellular recordings using the Binary Pursuit algorithm, as described in Pillow et al 2013.

You can find a blog post describing the basic geometry of the problem and our algorithm for solving it here.

Downloading the repository

  • From command line:

    git clone https://github.com/jpillow/BinaryPursuitSpikeSorting.git

  • In browser: click to Download ZIP and then unzip archive

Example Script

Open RUNME_bpspikesorting.m to see it in action using a simulated dataset

##Reference