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CFD Scores aren't in "Download Designs" spreadsheet #2

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marcus-r-kelly opened this issue Nov 26, 2020 · 4 comments
Closed

CFD Scores aren't in "Download Designs" spreadsheet #2

marcus-r-kelly opened this issue Nov 26, 2020 · 4 comments

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@marcus-r-kelly
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I have been using the hosted PrimeDesign at https://drugthatgene.pinellolab.partners.org/. I have checked the option to calcuate CFD score, and these scores do display correctly in my browser for the sgRNAs. However, when I download designs using the "Download Designs" button, there is a column for CFD score in the spreadsheet for which no values are given. I suspect this is a bug.
@jyhsu15
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jyhsu15 commented Nov 30, 2020

Thank you for catching this, should be fixed now!

@jyhsu15 jyhsu15 closed this as completed Nov 30, 2020
@marcus-r-kelly
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Thanks! Also, I notice that the CFD scores for all nicking guides in PE3b solutions have 0 CFD. I will admit that my understanding of CFD is not that deep, but is this correct?

@jyhsu15
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jyhsu15 commented Dec 1, 2020

Seems like calculating CFD is case-sensitive. Should be a super quick fix! Thank you.

@marcus-r-kelly
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Looks good now, thank you!

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@marcus-r-kelly @jyhsu15