Infographics

A simple script in R to produce infographics style PDFs for Healthcare Associated Infection (HCAI) reports.

Prerequisites

This script requires R/R studio to be already installed. Additionally, the following packages need to be installed and loaded:

• useful
• grid
• magick
• ggplot2
• cowplot
• stringr
• RColorBrewer
• Cairo
• gridExtra
• ggrepel

Running the script

To produce PDFs the user need to configure the script variables.
As an example to get the following:

the user would need to provide the following details:

• 1. Info_type <- 1
• 2. rate_number <- 24
• 3. plot_data <- data.frame(years = c("2007/08", "2008/09", "2009/10", "2010/11", "2011/12", "2012/13", "2013/14", "2014/15", "2015/16", "2016/17", "2017/18"), rate = c(100, 07, 60, 50, 40, 30, 20, 22, 20, 18, 20))
• 4. rhigh_factor <- 7
• 5. rlow_factor <- 4
• 6. rhigh_malenumber <- 269
• 7. rhigh_femnumber <- 250
• 8. rlow_malenumber <-13
• 9. rlow_femnumber <-16
• 10. previous_year <- "2007/08"
• 11. community_percent_old <- 40
• 12. hospital_percent_old <- 60
• 13. community_percent_new <- 64
• 14. hospital_percent_new <- 36

For description of the type of data/what should be inserted please see comments in the source code.