SAMtools: using stack buffer for bam1_t

pjotrp · Aug 4, 2010 · 4dfd489 · 4dfd489
1 parent 72f1f51
commit 4dfd489
Showing 1 changed file with 10 additions and 7 deletions.
diff --git a/src/mappings/swig/samtools.i b/src/mappings/swig/samtools.i
@@ -6,17 +6,20 @@
   #include <sam.h>
 %}
 
+%include typemaps.i
 
+%typemap(argout) bam1_t *b {
+  // happy
+}
+%typemap(in,numinputs=0) bam1_t *b(bam1_t bam1temp) {
+    $1 = &bam1temp;
+}
+
+int samread(samfile_t *fp, bam1_t *b);
 
-/*
-int samread(samfile_t *fp, bam1_t *OUTPUT);
 %ignore samread;
-*/
 %include <bam.h>
-%include "typemaps.i"
-%apply bam1_t *OUTPUT { bam1_t *b };
-int samread(samfile_t *fp, bam1_t *b);
-/* %include <sam.h> */
+%include <sam.h>