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For Bayesian Machine Learning

Update Dockerfile #7

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Update Dockerfile

Update Dockerfile #7

Workflow file for this run

.github/workflows/main.yml at 52f661a
name: For Bayesian Machine Learning
on: [push]
env:
REGISTRY: ghcr.io
jobs:
build:
name: Code Analysis
runs-on: ubuntu-latest
strategy:
max-parallel: 4
fail-fast: false
matrix:
python-version: [3.12]
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
if [ -f ${{ github.workspace }}/.devcontainer/requirements.txt ]; then pip install -r ${{ github.workspace }}/.devcontainer/requirements.txt; fi
- name: Lint with flake8
run: |
printf "\n"
echo "============================= flake8 session starts =============================="
printf "\n"
# stop the build if there are Python syntax errors or undefined names
printf "\n"
echo "Issues in relation to logic (F7), syntax (Python E9, Flake F7), mathematical
formulae symbols (F63), undefined variable names (F82):"
printf "\n src/data "
flake8 --count --select=E9,F63,F7,F82 --show-source --statistics src/data
printf "\n src/elements "
flake8 --count --select=E9,F63,F7,F82 --show-source --statistics src/elements
printf "\n src/functions "
flake8 --count --select=E9,F63,F7,F82 --show-source --statistics src/functions
printf "\n src/model "
flake8 --count --select=E9,F63,F7,F82 --show-source --statistics src/model/algorithm.py
flake8 --count --select=E9,F63,F7,F82 --show-source --statistics src/model/inference.py
printf "\n src/main.py "
flake8 --count --select=E9,F63,F7,F82 --show-source --statistics src/main.py
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
printf "\n\n"
echo "Complexity issues:"
printf "\n src/data "
flake8 --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics src/data
printf "\n src/elements "
flake8 --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics src/elements
printf "\n src/functions "
flake8 --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics src/functions
printf "\n src/model "
flake8 --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics src/model/algorithm.py
flake8 --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics src/model/inference.py
printf "\n src/main.py "
flake8 --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics src/main.py
- name: Lint with pylint
run: |
printf "\n"
echo "============================= pylint session starts =============================="
printf "\n Package src/data"
pylint --rcfile .pylintrc src/data
printf "\n Package src/elements"
pylint --rcfile .pylintrc src/elements
printf "\n Package src/functions"
pylint --rcfile .pylintrc src/functions
printf "\n Package src/model"
pylint --rcfile .pylintrc src/model/algorithm.py
pylint --rcfile .pylintrc src/model/inference.py
printf "\n Module src/main.py"
pylint --rcfile .pylintrc src/main.py
- name: Test with pytest
run: |
printf "\n"
echo "============================= pytest session starts =============================="
printf "\n pytest ..."
# pytest -o python_files=
- name: Coverage with pytest-cov
run: |
printf "\n "
echo "============================= coverage session starts =============================="
printf "\n Coverage ..."
# pytest --cov-report term-missing --cov src/data/... tests/data/...
packages:
name: GitHub Packages Container Registry
needs: build
if: ${{ false }}
runs-on: ubuntu-latest
permissions:
contents: read
packages: write
steps:
- name: Checkout repository
uses: actions/checkout@v4
- name: Logging into GitHub Container
uses: docker/login-action@v3
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}
- name: Docker meta
id: meta
uses: docker/metadata-action@v5
with:
tags: |
type=ref,event=branch
type=ref,event=pr
type=semver,pattern={{version}}
type=semver,pattern={{major}}.{{minor}}
- name: Build & Push
shell: bash
env:
REPOSITORY: ${{ github.repository }}
IMAGE_TAG: ${{ steps.meta.outputs.tags }}
run: |
docker build . --file Dockerfile --tag "$REGISTRY/$REPOSITORY:$IMAGE_TAG"
docker push ${{ env.REGISTRY }}/${{ env.REPOSITORY }}:${{ env.IMAGE_TAG }}
ecr:
name: Amazon Elastic Container Registry
needs: build
if: ${{ false }}
runs-on: ubuntu-latest
permissions:
id-token: write
contents: read
steps:
- uses: actions/checkout@v4
- name: Configure AWS Credentials
uses: aws-actions/configure-aws-credentials@v4
with:
role-to-assume: arn:aws:iam::${{ secrets.AWS_ENTRY }}:role/${{ secrets.AWS_ARN_ECR_ACTIONS }}
aws-region: ${{ secrets.AWS_REGION }}
- name: Login to Amazon ECR
id: login-ecr
uses: aws-actions/amazon-ecr-login@v2
with:
registries: ${{ secrets.AWS_ENTRY }}
mask-password: "true"
- name: Build, tag, and push image to Amazon ECR
id: build-publish
shell: bash
env:
ECR_REGISTRY: ${{ steps.login-ecr.outputs.registry }}
ECR_REPOSITORY: 'patterns'
IMAGE_TAG: ${{ github.event.repository.name }}
run: |
docker build . --file Dockerfile --tag "$ECR_REGISTRY/$ECR_REPOSITORY:$IMAGE_TAG"
docker push "$ECR_REGISTRY/$ECR_REPOSITORY:$IMAGE_TAG"
echo "An image has been pushed to $ECR_REGISTRY/$ECR_REPOSITORY"
echo "The image tag is $IMAGE_TAG"