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Usage

Execution and the BIDS format

The FitLins workflow takes as principal inputs a BIDS (Brain Imaging Data Structure) dataset, one or more derivative datasets, and a BIDS Stats Models file. We recommend using fMRIPrep for preprocessing your dataset.

The exact command to run fitlins depends on the Installation method. The common parts of the command follow the BIDS-Apps definition.

Example: :

fitlins data/bids_root/ out/ participant \
    -d data/derivatives/fmriprep/ -w work/

Command-Line Arguments