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Adding Huber et al 2017 DFE for HomSap #1099

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merged 2 commits into from Nov 10, 2021
Merged

Adding Huber et al 2017 DFE for HomSap #1099

merged 2 commits into from Nov 10, 2021

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chriscrsmith
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Adding a DFE for HomSap, from Huber et al., 2017.

Related to #1096

description=description,
long_description=long_description,
mutation_types=[neutral, negative],
proportions=[0.3, 0.7], # [0.3 and 0.7 were used in Xin's analysis, but I couldn't find these values in the Huber paper]
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@andrewkern andrewkern Nov 9, 2021

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i'm guessing this line is too long for the pre-commit syntax checkers

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ok, I wrapped that line and passed the pre-commit checks locally

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codecov bot commented Nov 9, 2021

Codecov Report

Merging #1099 (f2a6d89) into main (ca01354) will increase coverage by 0.00%.
The diff coverage is 100.00%.

Impacted file tree graph

@@           Coverage Diff           @@
##             main    #1099   +/-   ##
=======================================
  Coverage   99.52%   99.52%           
=======================================
  Files          92       92           
  Lines        2960     2972   +12     
  Branches      348      348           
=======================================
+ Hits         2946     2958   +12     
  Misses          6        6           
  Partials        8        8           
Impacted Files Coverage Δ
stdpopsim/catalog/HomSap/dfes.py 100.00% <100.00%> (ø)

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looks good to me @chriscrsmith.

@andrewkern andrewkern merged commit 190362c into popsim-consortium:main Nov 10, 2021
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PR closes #1096

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2 participants