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Update README.md
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vigji committed Mar 29, 2023
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This repository contains all the code for reproducing analyses and figures for the paper [Petrucco et al, Neural dynamics and architecture of the heading direction circuit in a vertebrate brain](https://www.biorxiv.org/content/10.1101/2022.04.27.489672v1).


The code is developed and tested in a `python==3.8.8` environment. It has been partially tested also in `python==3.9`,
The code is developed and tested in a `python==3.8.16` environment. It has been partially tested also in `python==3.9`,
other versions of Python are not guaranteed to work. We recommend to run this code in a new environment, which you can create with
```shell
create -n lotr-env python==3.8.8
create -n lotr-env python==3.8.16
```

## Installation:
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conda install ipykernel
ipykernel install --name lotr
```
Make sure that your Jupyter is configured to make correct use of the `matplotlib widgets` backends for the plots. Alternatively, you can remove the specification from the notebooks and leave the standard `matplotlib inline` instead.


## Description of the repository
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