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README.md

ICDOntologies

The ICDOntologies repository provides a list of mapping files in YAML format, as input for mapping combinations of ICD-O 3 Morphology and Topography codes to NCIt neoplasm core entities.

The repository is being developed by the Theoretical Oncogenomics group at the University of Zurich. It reflects work performed for the arrayMap and Progenetix resources and as part of the Global Alliance for Genomics and Health (GA4GH).

This repository contains mappings that have been manually curated and aims to be an open source for use and contibutions.

API Access

The mappings can be accessed through the Progenetix API, as seen in these examples:

Further documentation about the Progenetix API can be accessed through the resource's documentation pages.

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ICDOntologies repository provides mappings for combinations of ICD-O 3 Morphology and Topography codes to NCIt neoplasm core classes.

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