Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Merge pull request #138 from pszgaspar/master
UPDATE: new db specific release notes
- Loading branch information
Showing
3 changed files
with
35 additions
and
0 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,11 @@ | ||
<ul class="release-notes"> | ||
<li class="all">195 new <a href="https://gpcrdb.org/structure">structures</a> added (up until December 2022)</li> | ||
<li class="gpcrdb">New automated structure segment annotation based on DSSP and custom rules</li> | ||
<li class="gpcrdb">New ligand interaction calculation process using RDKit for higher precision and accuracy</li> | ||
<li class="all">Van der Waals interactions added</li> | ||
<li class="gpcrdb">Class C activation state reverted to author based annotation instead of <a href="https://docs.gpcrdb.org/structures.html#structure-descriptors">degree active calculation</a></li> | ||
<li class="gpcrdb">New <a href="https://gpcrdb.org/services">API</a> calls for ligand data</li> | ||
<li class="gpcrdb gproteindb"><a href="https://gpcrdb.org/signprot/matrix">GPCR - G protein interface interactions</a> figures are now downloadable</li> | ||
<li class="gpcr"><a href="https://gpcrdb.org/structure">Structure</a> annotation fixes</li> | ||
<li class="all">Minor bug and performance fixes</li> | ||
</ul> |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,10 @@ | ||
<ul class="release-notes"> | ||
<li class="gpcrdb"><a href="https://gpcrdb.org/drugs/drugbrowser">Drugs, targets and indications</a> page layout updated</li> | ||
<li class="all">54 new <a href="https://gpcrdb.org/structure">structures</a></li> | ||
<li class="all">All PDB files updated to their most recent version</li> | ||
<li class="gproteindb">G protein chimera mapping improved</li> | ||
<li class="gpcrdb gproteindb">Improved GPCR - G protein interface interactions</li> | ||
<li class="all">Interaction bug fixes</li> | ||
<li class="gpcrdb">Hydrogen atoms removed from <a href="https://gpcrdb.org/structure/homology_models">AlphaFold models</a></li> | ||
<li class="all">Minor bug and performance fixes</li> | ||
</ul> |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,14 @@ | ||
<ul class="release-notes"> | ||
<li class="gpcrdb gproteindb">New AlphaFold2-Multimer GPCR - G protein <a href="https://gproteindb.org/complex_models">complex models</a></li> | ||
<li class="gpcrdb gproteindb">Coupling data added to <a href="https://gproteindb.org/complex_models">complex models</a> table</li> | ||
<li class="gpcrdb">New refined complex <a href="https://gpcrdb.org/structure">structures</a></li> | ||
<li class="gproteindb">New refined complex <a href="https://gproteindb.org/g_protein_structure_browser">structures</a></li> | ||
<li class="gpcrdb gproteindb">Updated <a href="https://gproteindb.org/signprot/matrix">interface interaction matrix</a> with refined structures and AlphaFold2-Multimer models</li> | ||
<li class="gpcrdb gproteindb">New visualisation modes for GPCR - G protein interactions (biflare plot, matrix, 3D view)</li> | ||
<li class="gpcrdb gproteindb">Coupling interactions between residues with no generic residue number added</li> | ||
<li class="gpcrdb">Receptor sequences updated to latest UniProt canonical sequence</li> | ||
<li class="gproteindb">Gα segment names changed to include domain annotation (e.g. from H5 to G.H5)</li> | ||
<li class="gproteindb">API calls added for G protein data</li> | ||
<li class="all">New structures</li> | ||
<li class="all">Minor bug and performance fixes</li> | ||
</ul> |