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redirect to psyplot.github.io/psy-simple
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Chilipp committed Oct 5, 2021
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5 changes: 5 additions & 0 deletions docs/_templates/layout.html
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{% extends "!layout.html" %}

{% block extrahead %}
<meta http-equiv="refresh" content="0; URL=https://psyplot.github.io/psy-simple/" />
{% endblock %}
8 changes: 0 additions & 8 deletions docs/apigen.bash

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6 changes: 0 additions & 6 deletions docs/changelog.rst

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294 changes: 32 additions & 262 deletions docs/conf.py
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# -*- coding: utf-8 -*-
# Configuration file for the Sphinx documentation builder.
#
# psy-simple documentation build configuration file
# This file only contains a selection of the most common options. For a full
# list see the documentation:
# https://www.sphinx-doc.org/en/master/usage/configuration.html

# Disclaimer
# ----------
#
# Copyright (C) 2021 Helmholtz-Zentrum Hereon
# Copyright (C) 2020-2021 Helmholtz-Zentrum Geesthacht
# Copyright (C) 2016-2021 University of Lausanne
#
# This file is part of psy-simple and is released under the GNU LGPL-3.O license.
# See COPYING and COPYING.LESSER in the root of the repository for full
# licensing details.
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License version 3.0 as
# published by the Free Software Foundation.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU LGPL-3.0 license for more details.
# -- Path setup --------------------------------------------------------------

# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
#
# You should have received a copy of the GNU LGPL-3.0 license
# along with this program. If not, see <https://www.gnu.org/licenses/>.
# import os
# import sys
# sys.path.insert(0, os.path.abspath('.'))


import sphinx
import inspect
import os
import os.path as osp
import sys
import re
import six
import subprocess as spr
from itertools import chain
from collections import defaultdict
import warnings
import psyplot
from psyplot.plotter import Formatoption, Plotter
import psy_simple
from autodocsumm import AutoSummClassDocumenter
# -- Project information -----------------------------------------------------

project = 'psy-simple'
copyright = '2021, Philipp S. Sommer'
author = 'Philipp S. Sommer'

# automatically import all plotter classes
psyplot.rcParams['project.auto_import'] = True
# include links to the formatoptions in the documentation of the
# :attr:`psyplot.project.ProjectPlotter` methods
Plotter.include_links(True)
# The full version, including alpha/beta/rc tags
release = '1.3.1'

warnings.filterwarnings('ignore', message="axes.color_cycle is deprecated")
warnings.filterwarnings(
'ignore', message=("This has been deprecated in mpl 1.5,"))
warnings.filterwarnings('ignore', message="invalid value encountered in ")
warnings.filterwarnings('ignore', message=r"\s*examples.directory")
warnings.filterwarnings('ignore', message='numpy.dtype size changed')

# -- General configuration ------------------------------------------------
# -- General configuration ---------------------------------------------------

# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
'sphinx.ext.doctest',
'sphinx.ext.intersphinx',
'sphinx.ext.autosummary',
'sphinx.ext.todo',
'sphinx.ext.viewcode',
'matplotlib.sphinxext.plot_directive',
'IPython.sphinxext.ipython_console_highlighting',
'IPython.sphinxext.ipython_directive',
'psyplot.sphinxext.extended_napoleon',
'autodocsumm',
'sphinx_nbexamples',
]

# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']

# on_rtd is whether we are on readthedocs.org, this line of code grabbed from
# docs.readthedocs.org
on_rtd = os.environ.get('READTHEDOCS', None) == 'True'

# process the examples if they don't exist already
process_examples = (
not osp.exists(osp.join(osp.dirname(__file__), 'examples')))

if on_rtd:
spr.call([sys.executable] +
('-m ipykernel install --user --name python3 '
'--display-name python3').split())

if not osp.exists(osp.join(osp.dirname(__file__), 'api')):
spr.check_call(['bash', 'apigen.bash'])

# HACK: Create an empty file called '<string>' to prevent
# https://github.com/sphinx-doc/sphinx/issues/5614
if not osp.exists('<string>'):
with open('<string>', 'w') as f:
pass

# The cdo example would require the installation of climate data operators
# which is a bit of an overkill
example_gallery_config = dict(
urls='https://github.com/psyplot/psy-simple/blob/master/examples',
)

napoleon_use_admonition_for_examples = True

# The suffix(es) of source filenames.
# You can specify multiple suffix as a list of string:
source_suffix = '.rst'

# The master toctree document.
master_doc = 'index'

autodoc_default_options = {
'show_inheritance': True,
'autosummary': True,
}

autoclass_content = 'both'

not_document_data = ['psy_simple.plugin.defaultParams',
'psy_simple.plugin.rcParams']

ipython_savefig_dir = os.path.join(os.path.dirname(__file__), '_static')

# General information about the project.
project = 'psy-simple'
copyright = ", ".join(
psy_simple.__copyright__.strip().replace("Copyright (C) ", "").splitlines()
)
author = psy_simple.__author__

# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
# built documents.
#
# The short X.Y version.
version = re.match(r'\d+\.\d+\.\d+', psy_simple.__version__).group()
# The full version, including alpha/beta/rc tags.
release = psy_simple.__version__

# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
#
# This is also used if you do content translation via gettext catalogs.
# Usually you set "language" from the command line for these cases.
language = None

# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
exclude_patterns = ['_build']

# The name of the Pygments (syntax highlighting) style to use.
pygments_style = 'sphinx'

# If true, `todo` and `todoList` produce output, else they produce nothing.
todo_include_todos = True
# This pattern also affects html_static_path and html_extra_path.
exclude_patterns = []

# The master toctree document.
master_doc = 'index'

# -- Options for HTML output ----------------------------------------------
# -- Options for HTML output -------------------------------------------------

# The theme to use for HTML and HTML Help pages. See the documentation for
# a list of builtin themes.
#
html_theme = 'alabaster'

if not on_rtd: # only import and set the theme if we're building docs locally
import sphinx_rtd_theme
html_theme = 'sphinx_rtd_theme'
html_theme_path = [sphinx_rtd_theme.get_html_theme_path()]

# Add any paths that contain custom static files (such as style sheets)
# here, relative to this directory. They are copied after the builtin
# static files, so a file named "default.css" will overwrite the builtin
# "default.css".
html_static_path = ['_static']

# otherwise, readthedocs.org uses their theme by default, so no need to specify

# Output file base name for HTML help builder.
htmlhelp_basename = 'psy-simpledoc'

# -- Options for LaTeX output ---------------------------------------------

latex_elements = {
# Additional stuff for the LaTeX preamble.
'preamble': r'\setcounter{tocdepth}{10}'
}

# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title,
# author, documentclass [howto, manual, or own class]).
latex_documents = [
(master_doc, 'psy-simple.tex', u'psy-simple Documentation',
author, 'manual'),
]


# -- Options for manual page output ---------------------------------------

# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [
(master_doc, 'psy-simple', u'psy-simple Documentation',
[author], 1)
]


# -- Options for Texinfo output -------------------------------------------

# Grouping the document tree into Texinfo files. List of tuples
# (source start file, target name, title, author,
# dir menu entry, description, category)
texinfo_documents = [
(master_doc, 'psy-simple', u'psy-simple Documentation',
author, 'psy-simple', 'The psyplot plugin for simple visualizations',
'Miscellaneous'),
]


# -- Options for Epub output ----------------------------------------------

# Bibliographic Dublin Core info.
epub_title = project
epub_author = author
epub_publisher = author
epub_copyright = copyright

# A list of files that should not be packed into the epub file.
epub_exclude_files = ['search.html']

# Example configuration for intersphinx: refer to the Python standard library.
intersphinx_mapping = {
'pandas': ('https://pandas.pydata.org/pandas-docs/stable/', None),
'numpy': ('https://docs.scipy.org/doc/numpy/', None),
'matplotlib': ('http://matplotlib.org/stable/', None),
'sphinx': ('https://www.sphinx-doc.org/en/stable/', None),
'xarray': ('https://xarray.pydata.org/en/stable/', None),
'cartopy': ('https://scitools.org.uk/cartopy/docs/latest/', None),
'mpl_toolkits': ('https://matplotlib.org/basemap/', None),
'psyplot': ('https://psyplot.github.io/psyplot/', None),
'psy_maps': (
'https://psyplot.readthedocs.io/projects/psy-maps/en/latest/', None),
'psy_reg': ('https://psyplot.readthedocs.io/projects/psy-reg/en/latest/',
None),
'python': ('https://docs.python.org/3/', None),
}


def group_formatoptions(app, what, name, obj, section, parent):
if inspect.isclass(obj) and issubclass(obj, Formatoption):
return 'Formatoption classes'
elif inspect.isclass(obj) and issubclass(obj, Plotter):
return 'Plotter classes'
elif (inspect.isclass(parent) and issubclass(parent, Plotter) and
isinstance(obj, Formatoption)):
return obj.groupname


class PlotterAutoClassDocumenter(AutoSummClassDocumenter):
"""A ClassDocumenter that includes all the formatoption of a plotter"""

priority = AutoSummClassDocumenter.priority + 0.1

def filter_members(self, *args, **kwargs):
ret = super(AutoSummClassDocumenter, self).filter_members(
*args, **kwargs)
if issubclass(self.object, Plotter):
fmt_members = defaultdict(set)
all_fmt = set(self.object._get_formatoptions())
for i, (mname, member, isattr) in enumerate(ret):
if isinstance(member, Formatoption):
fmt_members[member.group].add((mname, member, isattr))
all_fmt.remove(mname)
for fmt in all_fmt:
fmto = getattr(self.object, fmt)
fmt_members[fmto.group].add((fmt, fmto, True))
ret.extend(
(tup for tup in chain(*map(sorted, fmt_members.values()))
if tup not in ret))
return ret


def setup(app):
app.add_autodocumenter(PlotterAutoClassDocumenter)
app.connect('autodocsumm-grouper', group_formatoptions)
return {'version': sphinx.__display_version__, 'parallel_read_safe': True}
# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
# so a file named "default.css" will overwrite the builtin "default.css".
html_static_path = ['_static']
8 changes: 0 additions & 8 deletions docs/contribute.rst

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17 changes: 0 additions & 17 deletions docs/environment.yml

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