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  1. phasiRNAClassifier phasiRNAClassifier Public

    Multi-modal Machine learning based pipeline using NLP -Bag-of-Words to identify sequence-based and structural features that distinguish phasiRNAs from other small RNAs

    Python 1 1

  2. miTRATA miTRATA Public

    miTRATA: a web-based tool for microRNA Truncation and Tailing Analysis

    Python

  3. RShinyApp RShinyApp Public

    An example RShinyApp integrating machine learning algorithms

    R

  4. Additional-Scripts Additional-Scripts Public

    Study specific NGS (e.g. PacBio) 'big' data analytics scripts (Python , R, AWS, Docker)

    Python 2 1

  5. PWM_StatisticalModel PWM_StatisticalModel Public

    Position Weigh Matrix for assessing differences in two types of small RNA sequences using non-parametric test (Python, Scipy, plotly)

    Python 1

  6. Data-Analytics Data-Analytics Public

    Data Analytics scripts for machine learning and deep learning using EHR data, Pandas, Sci-kit learn, NLTK, SpaCy, Tensorflow, Keras, SparkML, Seaborn

    Python 2