bioinfo/Subread: update to 1.6.3

pveber · Dec 28, 2018 · 598809d · 598809d
1 parent b1211eb
commit 598809d
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diff --git a/etc/docker-images/subread/1.6.3/Dockerfile b/etc/docker-images/subread/1.6.3/Dockerfile
@@ -0,0 +1,9 @@
+FROM pveber/bistro-base:stretch
+
+RUN wget \
+      -O subread-1.6.3.tar.gz \
+      "https://downloads.sourceforge.net/project/subread/subread-1.6.3/subread-1.6.3-source.tar.gz"
+RUN tar xvfz subread-1.6.3.tar.gz
+RUN apt-get update && apt-get install -y zlib1g-dev
+RUN cd subread-1.6.3-source/src && make -f Makefile.Linux
+RUN mv subread-1.6.3-source/bin/* /usr/bin
diff --git a/lib/bioinfo/bistro_bioinfo.ml b/lib/bioinfo/bistro_bioinfo.ml
@@ -2305,7 +2305,7 @@ end
 
 module Subread = struct
 
-  let env = docker_image ~account:"pveber" ~name:"subread" ~tag:"1.6.0" ()
+  let env = docker_image ~account:"pveber" ~name:"subread" ~tag:"1.6.3" ()
 
   class type count_table = object
     inherit tsv