bioinfo/Samtools: fixed sort wrapper

pveber · Nov 10, 2017 · be180ee · be180ee
1 parent 3c47317
commit be180ee
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/lib/bioinfo/samtools.ml b/lib/bioinfo/samtools.ml
@@ -50,7 +50,7 @@ let sort ?on:order bam =
     samtools "sort" [
       option (fun o -> flag string "-n" (o = `name)) order ;
       dep bam ;
-      dest ;
+      opt "-o" Fn.id dest ;
     ] ;
     mv (seq [dest ; string ".bam"]) dest ;
   ]